Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Bo8g061330	Brassica oleracea	HOM04D002321	ORTHO04D060525	7.0e-26	119.8	119	100.0
Bo5g076490	Brassica oleracea	HOM04D002321	ORTHO04D014145	3.7e-19	97.4	51	96.1
Bo3g066380	Brassica oleracea	HOM04D002487	ORTHO04D014145	1.1e-15	85.9	51	88.2
Bo1g049430	Brassica oleracea	HOM04D002321	ORTHO04D002274	1.4e-10	68.9	50	70.0
Brara.K00084	Brassica rapa	HOM04D002321	ORTHO04D002274	2.4e-10	68.2	51	68.6
Bo7g111460	Brassica oleracea	HOM04D002321	ORTHO04D002274	5.4e-10	67.0	50	70.0
Tp7g25440	Schrenkiella parvula	HOM04D002321	ORTHO04D002274	7.0e-10	66.6	51	72.5
Brara.A01720	Brassica rapa	HOM04D002321	ORTHO04D002274	1.7e-08	62.0	49	65.3
COL.COLO4_27176	Corchorus olitorius	HOM04D002321	ORTHO04D002274	4.2e-07	57.4	40	67.5
Gorai.002G069700	Gossypium raimondii	HOM04D002321	ORTHO04D002274	2.1e-06	55.1	40	65.0
AL7G25270	Arabidopsis lyrata	HOM04D002321	ORTHO04D002274	2.7e-06	54.7	51	62.7
Bo8g052840	Brassica oleracea	HOM04D002321	ORTHO04D002274	6.1e-06	53.5	32	81.2
FVE17153	Fragaria vesca	HOM04D002321	ORTHO04D002274	8.0e-06	53.1	50	54.0
TCA.TCM_031520	Theobroma cacao	HOM04D002321	ORTHO04D002274	8.0e-06	53.1	40	62.5

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment