Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Bo2g041380	Brassica oleracea	HOM04D006604	ORTHO04D008444	1.9e-82	308.1	160	100.0
Bo4g014630	Brassica oleracea	HOM04D006604	ORTHO04D008444	4.5e-52	207.2	192	64.1
Tp4g24220	Schrenkiella parvula	HOM04D006604	ORTHO04D008444	2.0e-44	181.8	195	56.9
Brara.E00258	Brassica rapa	HOM04D006604	ORTHO04D008444	1.3e-43	179.1	191	58.6
AL4G40310	Arabidopsis lyrata	HOM04D006604	ORTHO04D008444	1.1e-42	176.0	193	57.0
AT2G41950	Arabidopsis thaliana	HOM04D006604	ORTHO04D008444	1.4e-42	175.6	195	55.4
Carubv10023853m.g	Capsella rubella	HOM04D006604	ORTHO04D008444	7.1e-42	173.3	195	54.4
THA.LOC104824483	Tarenaya hassleriana	HOM04D006604	ORTHO04D008444	7.9e-33	143.3	192	47.4
Ciclev10012299m.g	Citrus clementina	HOM04D006604	ORTHO04D008444	9.0e-29	129.8	191	45.5
Gorai.002G155400	Gossypium raimondii	HOM04D006604	ORTHO04D008444	2.2e-27	125.2	191	43.5
TCA.TCM_024954	Theobroma cacao	HOM04D006604	ORTHO04D008444	2.2e-27	125.2	191	45.0
COL.COLO4_29358	Corchorus olitorius	HOM04D006604	ORTHO04D008444	1.4e-26	122.5	191	41.9
Cpa.g.sc9.26	Carica papaya	HOM04D006604	ORTHO04D008444	5.5e-26	120.6	190	40.5
FVE17969	Fragaria vesca	HOM04D006604	ORTHO04D008444	5.5e-26	120.6	189	41.8
Potri.006G194600	Populus trichocarpa	HOM04D006604	ORTHO04D008444	9.4e-26	119.8	190	42.1
MDO.mRNA.g.1149.2	Malus domestica	HOM04D006604	ORTHO04D008444	9.4e-26	119.8	190	41.6
Prupe.7G081100	Prunus persica	HOM04D006604	ORTHO04D008444	1.2e-25	119.4	191	41.4
HBR1265G014	Hevea brasiliensis	HOM04D006604	ORTHO04D008444	2.7e-25	118.2	191	40.3
RCO.g.28582.000014	Ricinus communis	HOM04D006604	ORTHO04D008444	2.3e-24	115.2	190	40.0
Achn350061	Actinidia chinensis	HOM04D006604	ORTHO04D008444	6.7e-24	113.6	193	37.8
NNU_01777	Nelumbo nucifera	HOM04D006604	ORTHO04D008444	6.7e-24	113.6	194	38.7
GSVIVG01033467001	Vitis vinifera	HOM04D006604	ORTHO04D008444	3.3e-23	111.3	187	40.6
Manes.08G042600	Manihot esculenta	HOM04D006604	ORTHO04D008444	9.7e-23	109.8	191	38.2
MELO3C009608	Cucumis melo	HOM04D006604	ORTHO04D008444	1.7e-22	109.0	192	38.0
Cucsa.242520	Cucumis sativus L.	HOM04D006604	ORTHO04D008444	2.2e-22	108.6	192	38.0
Solyc03g053020.2	Solanum lycopersicum	HOM04D006604	ORTHO04D008444	6.3e-22	107.1	193	36.8
Eucgr.A02470	Eucalyptus grandis	HOM04D006604	ORTHO04D008444	1.8e-21	105.5	185	37.8
CAN.G1314.3	Capsicum annuum	HOM04D006604	ORTHO04D008444	1.8e-21	105.5	191	36.6
Migut.J01868	Erythranthe guttata	HOM04D006604	ORTHO04D008444	2.4e-21	105.1	188	37.8
Peaxi162Scf00463g00417	Petunia axillaris	HOM04D006604	ORTHO04D008444	3.1e-21	104.8	191	35.6
Cc06_g15510	Coffea canephora	HOM04D006604	ORTHO04D008444	4.1e-21	104.4	193	35.8
AUR62015334	Chenopodium quinoa	HOM04D006604	ORTHO04D008444	4.1e-21	104.4	187	38.5
AH006883	Amaranthus hypochondriacus	HOM04D006604	ORTHO04D008444	6.9e-21	103.6	189	35.4
ZJU.LOC107432325	Ziziphus jujuba	HOM04D006604	ORTHO04D008444	2.0e-20	102.1	192	36.5
PGSC0003DMG400001108	Solanum tuberosum	HOM04D006604	ORTHO04D008444	2.6e-20	101.7	188	35.6
AUR62012005	Chenopodium quinoa	HOM04D006604	ORTHO04D008444	3.4e-20	101.3	187	37.4
DCAR_013671	Daucus carota	HOM04D006604	ORTHO04D008444	1.7e-19	99.0	187	37.4
Bv3_069030_wrhu	Beta vulgaris	HOM04D006604	ORTHO04D008444	2.9e-19	98.2	192	35.9
UGI.Scf00024.3051	Utricularia gibba	HOM04D006604	ORTHO04D008444	2.5e-18	95.1	188	35.1
Vradi03g00350	Vigna radiata var. radiata	HOM04D006604	ORTHO04D008444	1.2e-17	92.8	185	38.4
Araip.K5K9F	Arachis ipaensis	HOM04D006604	ORTHO04D008444	1.6e-17	92.4	187	39.6
Araip.L60YZ	Arachis ipaensis	HOM04D006604	ORTHO04D008444	2.7e-17	91.7	187	39.6
Medtr7g093640	Medicago truncatula	HOM04D006604	ORTHO04D008444	4.7e-17	90.9	188	34.0
TPR.G13363	Trifolium pratense	HOM04D006604	ORTHO04D008444	4.7e-17	90.9	188	34.0
Glyma.19G149900	Glycine max	HOM04D006604	ORTHO04D008444	5.1e-16	87.4	185	35.7
Ca_07334.g	Cicer arietinum	HOM04D006604	ORTHO04D008444	5.1e-16	87.4	185	34.1
Glyma.03G146600	Glycine max	HOM04D006604	ORTHO04D008444	8.8e-16	86.7	185	36.2
C.cajan_09582.g	Cajanus cajan	HOM04D006604	ORTHO04D008444	4.4e-15	84.3	186	36.0
Araip.AMG2G	Arachis ipaensis	HOM04D006604	ORTHO04D008444	1.3e-14	82.8	194	37.1
ATR0598G218	Amborella trichopoda	HOM04D006604	ORTHO04D008444	1.3e-14	82.8	190	32.1
Cla017559.g	Citrullus lanatus	HOM04D006604	ORTHO04D008444	1.7e-11	72.4	152	33.6
Zm00001d028338	Zea mays	HOM04D006604	ORTHO04D008444	2.9e-11	71.6	198	28.3
MDO.mRNA.g.9108.3	Malus domestica	HOM04D006604	ORTHO04D008444	5.0e-11	70.9	71	59.2
Araip.R83UM	Arachis ipaensis	HOM04D006604	ORTHO04D008444	1.4e-10	69.3	170	34.1
CAN.G274.29	Capsicum annuum	HOM04D006604	ORTHO04D008444	9.4e-10	66.6	69	49.3
LOC_Os03g12560	Oryza sativa ssp. japonica	HOM04D006604	ORTHO04D008444	9.4e-10	66.6	200	27.5
Achn365691	Actinidia chinensis	HOM04D006604	ORTHO04D008444	3.6e-09	64.7	51	54.9
PAB00011130	Picea abies	HOM04D006604	ORTHO04D008444	2.8e-06	55.1	183	24.6

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment