Interactive Phylogenetics Module

Gene Id
Bo1g054880

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Bo1g054880 Brassica oleracea HOM04D003277 ORTHO04D006077 0.0e+00 3611.2 1828 100.0
Brara.A01917 Brassica rapa HOM04D003277 ORTHO04D006077 0.0e+00 3589.3 1828 99.5
AL7G38710 Arabidopsis lyrata HOM04D003277 ORTHO04D006077 0.0e+00 3488.4 1829 96.4
Carubv10007699m.g Capsella rubella HOM04D003277 ORTHO04D006077 0.0e+00 3478.3 1829 96.2
AT4G16340 Arabidopsis thaliana HOM04D003277 ORTHO04D006077 0.0e+00 3472.6 1829 95.8
Tp7g14850 Schrenkiella parvula HOM04D003277 ORTHO04D006077 0.0e+00 3443.7 1828 95.6
THA.LOC104823022 Tarenaya hassleriana HOM04D003277 ORTHO04D006077 0.0e+00 3221.4 1829 88.1
Ciclev10010893m.g Citrus clementina HOM04D003277 ORTHO04D006077 0.0e+00 3017.6 1828 83.3
Gorai.008G189300 Gossypium raimondii HOM04D003277 ORTHO04D006077 0.0e+00 2986.8 1835 81.8
HBR2459G054 Hevea brasiliensis HOM04D003277 ORTHO04D006077 0.0e+00 2986.4 1850 81.5
Manes.17G018400 Manihot esculenta HOM04D003277 ORTHO04D006077 0.0e+00 2984.1 1848 81.3
Potri.011G024000 Populus trichocarpa HOM04D003277 ORTHO04D006077 0.0e+00 2984.1 1847 81.4
GSVIVG01014992001 Vitis vinifera HOM04D003277 ORTHO04D006077 0.0e+00 2972.6 1848 81.4
RCO.g.30024.000059 Ricinus communis HOM04D003277 ORTHO04D006077 0.0e+00 2969.1 1845 81.4
COL.COLO4_11259 Corchorus olitorius HOM04D003277 ORTHO04D006077 0.0e+00 2966.8 1877 80.2
Prupe.4G132800 Prunus persica HOM04D003277 ORTHO04D006077 0.0e+00 2930.6 1825 80.8
ZJU.LOC107417911 Ziziphus jujuba HOM04D003277 ORTHO04D006077 0.0e+00 2924.4 1818 81.3
Pbr033594.1.g Pyrus bretschneideri HOM04D003277 ORTHO04D006077 0.0e+00 2914.0 1830 80.5
Cucsa.239810 Cucumis sativus L. HOM04D003277 ORTHO04D006077 0.0e+00 2898.6 1818 80.9
Glyma.08G148300 Glycine max HOM04D003277 ORTHO04D006077 0.0e+00 2892.1 1840 79.5
Cc03_g16320 Coffea canephora HOM04D003277 ORTHO04D006077 0.0e+00 2887.8 1848 79.2
DCAR_001249 Daucus carota HOM04D003277 ORTHO04D006077 0.0e+00 2874.7 1863 79.2
Glyma.15G212800 Glycine max HOM04D003277 ORTHO04D006077 0.0e+00 2870.9 1816 79.7
CAN.G68.16 Capsicum annuum HOM04D003277 ORTHO04D006077 0.0e+00 2860.1 1834 79.1
Medtr8g056900 Medicago truncatula HOM04D003277 ORTHO04D006077 0.0e+00 2859.3 1819 79.5
Cla005494.g Citrullus lanatus HOM04D003277 ORTHO04D006077 0.0e+00 2842.0 1818 79.6
Araip.59YT6 Arachis ipaensis HOM04D003277 ORTHO04D006077 0.0e+00 2841.6 1818 79.5
Bv7_162790_awaf Beta vulgaris HOM04D003277 ORTHO04D006077 0.0e+00 2833.9 1840 78.0
TCA.TCM_011918 Theobroma cacao HOM04D003277 ORTHO04D006077 0.0e+00 2830.8 1745 81.6
AH021949 Amaranthus hypochondriacus HOM04D003277 ORTHO04D006077 0.0e+00 2825.8 1834 78.0
Eucgr.K02348 Eucalyptus grandis HOM04D003277 ORTHO04D006077 0.0e+00 2825.4 1758 81.3
Vradi0367s00020 Vigna radiata var. radiata HOM04D003277 ORTHO04D006077 0.0e+00 2819.3 1907 76.2
C.cajan_36319.g Cajanus cajan HOM04D003277 ORTHO04D006077 0.0e+00 2802.7 1814 78.7
Migut.H02557 Erythranthe guttata HOM04D003277 ORTHO04D006077 0.0e+00 2778.8 1850 77.0
ATR0068G076 Amborella trichopoda HOM04D003277 ORTHO04D006077 0.0e+00 2770.0 1853 75.7
FVE18510 Fragaria vesca HOM04D003277 ORTHO04D006077 0.0e+00 2756.1 1971 73.1
MELO3C012607 Cucumis melo HOM04D003277 ORTHO04D006077 0.0e+00 2738.0 1818 77.6
AUR62022352 Chenopodium quinoa HOM04D003277 ORTHO04D006077 0.0e+00 2730.3 1862 75.2
Ca_15757.g Cicer arietinum HOM04D003277 ORTHO04D006077 0.0e+00 2726.8 1819 76.7
AUR62034357 Chenopodium quinoa HOM04D003277 ORTHO04D006077 0.0e+00 2722.6 1818 76.3
TPR.G9397 Trifolium pratense HOM04D003277 ORTHO04D006077 0.0e+00 2679.4 1916 72.4
Zm00001d029004 Zea mays HOM04D003277 ORTHO04D006077 0.0e+00 2643.2 1834 73.7
Mapoly0021s0072 Marchantia polymorpha HOM04D003277 ORTHO04D006077 0.0e+00 2414.8 1848 67.6
UGI.Scf00867.19374 Utricularia gibba HOM04D003277 ORTHO04D006077 0.0e+00 2366.7 1935 65.4
SMO011G0025 Selaginella moellendorffii HOM04D003277 ORTHO04D006077 0.0e+00 2338.9 1803 65.7
Pp3c1_25190 Physcomitrium patens HOM04D003277 ORTHO04D006077 0.0e+00 2195.6 1882 61.3
Pp3c4_25310 Physcomitrium patens HOM04D003277 ORTHO04D006077 0.0e+00 2192.5 1885 61.3
Pp3c9_15160 Physcomitrium patens HOM04D003277 ORTHO04D006077 0.0e+00 2177.1 1857 60.5
Pp3c3_15370 Physcomitrium patens HOM04D003277 ORTHO04D006077 0.0e+00 2167.5 1890 59.8
Pp3c10_16640 Physcomitrium patens HOM04D003277 ORTHO04D006077 0.0e+00 2146.7 1886 59.9
Pp3c15_8680 Physcomitrium patens HOM04D003277 ORTHO04D006077 0.0e+00 2122.4 1858 59.3
NNU_03339 Nelumbo nucifera HOM04D003277 ORTHO04D006077 0.0e+00 1870.5 1105 85.2
Zm00001d047540 Zea mays HOM04D003277 ORTHO04D006077 0.0e+00 1654.0 1170 71.6
Achn206321 Actinidia chinensis HOM04D003277 ORTHO04D006077 0.0e+00 1619.8 1030 81.2
Cpa.g.sc34.42 Carica papaya HOM04D003277 ORTHO04D006077 0.0e+00 1597.4 951 86.0
LOC_Os03g21080 Oryza sativa ssp. japonica HOM04D003277 ORTHO04D006077 0.0e+00 1557.0 968 81.1
Peaxi162Scf01205g00167 Petunia axillaris HOM04D003277 ORTHO04D006077 0.0e+00 1545.4 928 85.6
PAB00016775 Picea abies HOM04D003277 ORTHO04D006077 0.0e+00 1478.8 933 79.8
Solyc08g016050.2 Solanum lycopersicum HOM04D003277 ORTHO04D006077 0.0e+00 1422.5 928 80.5
MDO.mRNA.g.5023.17 Malus domestica HOM04D003277 ORTHO04D006077 0.0e+00 1372.5 1379 56.2
MDO.mRNA.g.1219.4 Malus domestica HOM04D003277 ORTHO04D006077 0.0e+00 1334.7 1042 67.5
Peaxi162Scf01205g00192 Petunia axillaris HOM04D003277 ORTHO04D006077 0.0e+00 1322.8 887 74.3
PAB00017992 Picea abies HOM04D003277 ORTHO04D006077 8.0e-238 827.8 666 63.1
Solyc08g016070.1 Solanum lycopersicum HOM04D003277 ORTHO04D006077 5.0e-224 781.9 584 67.6
MDO.mRNA.g.1219.3 Malus domestica HOM04D003277 ORTHO04D006077 2.4e-194 683.3 694 57.8
Achn206301 Actinidia chinensis HOM04D003277 ORTHO04D006077 7.8e-185 651.7 578 60.4
Solyc08g016060.1 Solanum lycopersicum HOM04D003277 ORTHO04D018339 1.6e-129 468.0 256 88.7
MDO.mRNA.g.5023.19 Malus domestica HOM04D003277 ORTHO04D006077 3.0e-112 410.6 282 79.8
Zm00001d042645 Zea mays HOM04D003277 ORTHO04D017602 4.8e-110 403.3 399 56.9
AL727U10010 Arabidopsis lyrata HOM04D003277 ORTHO04D006077 2.3e-104 384.4 204 98.5
Prupe.3G108400 Prunus persica HOM04D003277 ORTHO04D006077 2.2e-102 377.9 336 64.6
Cc03_g11030 Coffea canephora HOM04D003277 ORTHO04D006077 3.0e-75 287.7 231 66.7
MDO.mRNA.g.5023.18 Malus domestica HOM04D003277 ORTHO04D144991 5.4e-69 266.9 145 88.3
Cpa.g.sc34.43 Carica papaya HOM04D003277 ORTHO04D018339 5.4e-69 266.9 144 88.2
Peaxi162Scf00280g00008 Petunia axillaris HOM04D003277 ORTHO04D018339 1.3e-67 262.3 228 62.7
Zm00001d012342 Zea mays HOM04D003277 ORTHO04D017602 2.9e-54 218.0 237 53.2
Achn206311 Actinidia chinensis HOM04D003277 ORTHO04D018339 1.4e-53 215.7 121 86.8
Zm00001d007025 Zea mays HOM04D000025 ORTHO04D000859 7.3e-50 203.4 135 74.8
Zm00001d035539 Zea mays HOM04D003277 ORTHO04D019298 7.6e-47 193.4 196 53.6
CAN.G338.64 Capsicum annuum HOM04D003277 ORTHO04D019170 1.7e-38 165.6 155 58.1
Zm00001d046856 Zea mays HOM04D003277 ORTHO04D006493 2.7e-36 158.3 121 66.9
C.cajan_36329.g Cajanus cajan HOM04D003277 ORTHO04D006077 3.9e-35 154.5 90 80.0
C.cajan_39504.g Cajanus cajan HOM04D003277 ORTHO04D006077 9.6e-34 149.8 90 77.8
Zm00001d024153 Zea mays HOM04D003277 ORTHO04D017602 1.0e-27 129.8 234 36.3
Cpa.g.sc34.44 Carica papaya HOM04D003277 ORTHO04D017602 1.0e-27 129.8 108 64.8
Zm00001d018368 Zea mays HOM04D003480 ORTHO04D004185 1.9e-26 125.6 93 69.9
Zm00001d007384 Zea mays HOM04D001363 ORTHO04D006077 2.5e-26 125.2 86 72.1
Zm00001d038664 Zea mays HOM04D001363 ORTHO04D006493 1.3e-25 122.9 90 67.8
CAN.G151.23 Capsicum annuum HOM04D003277 ORTHO04D001475 2.8e-25 121.7 88 68.2
CAN.G578.10 Capsicum annuum HOM04D003277 ORTHO04D001475 6.3e-25 120.6 96 64.6
Potri.004G000700 Populus trichocarpa HOM04D003277 ORTHO04D017602 1.1e-24 119.8 96 64.6
Zm00001d035534 Zea mays HOM04D000727 ORTHO04D000574 2.0e-23 115.5 163 47.2
CAN.G307.30 Capsicum annuum HOM04D003277 ORTHO04D001475 1.0e-22 113.2 168 45.2
C.cajan_36331.g Cajanus cajan HOM04D003277 ORTHO04D006077 1.6e-20 105.9 68 75.0
CAN.G861.1 Capsicum annuum HOM04D003277 ORTHO04D001475 1.3e-17 96.3 85 57.6
TPR.G35990 Trifolium pratense HOM04D003277 ORTHO04D019170 1.1e-16 93.2 71 66.2
TPR.G38062 Trifolium pratense HOM04D003277 ORTHO04D019170 1.8e-16 92.4 71 64.8
Zm00001d043638 Zea mays HOM04D000025 ORTHO04D000859 1.3e-14 86.3 56 73.2
UGI.Scf00204.11429 Utricularia gibba HOM04D003277 ORTHO04D265670 1.7e-14 85.9 61 68.9
COL.COLO4_27266 Corchorus olitorius HOM04D000003 ORTHO04D000171 1.4e-13 82.8 68 60.3
Cla004772.g Citrullus lanatus HOM04D003277 ORTHO04D019298 1.2e-12 79.7 79 48.1
CAN.G83.9 Capsicum annuum HOM04D003277 ORTHO04D019170 1.6e-12 79.3 71 59.2
C.cajan_36330.g Cajanus cajan HOM04D003277 ORTHO04D019298 1.0e-11 76.6 88 52.3
Cpa.g.sc3151.1 Carica papaya HOM04D003277 ORTHO04D019298 1.4e-11 76.3 92 47.8
NNU_03340 Nelumbo nucifera HOM04D003277 ORTHO04D006077 1.8e-11 75.9 182 33.5
Zm00001d029161 Zea mays HOM04D000025 ORTHO04D000859 3.3e-10 71.6 45 73.3
CAN.G83.10 Capsicum annuum HOM04D003277 ORTHO04D068472 2.2e-09 68.9 133 33.8
CAN.G103.4 Capsicum annuum HOM04D002496 ORTHO04D001475 2.6e-07 62.0 32 81.2

Actinidia chinensis (3 genes)
Amaranthus hypochondriacus (1 genes)
Amborella trichopoda (1 genes)
Arabidopsis lyrata (2 genes)
Arabidopsis thaliana (1 genes)
Arachis ipaensis (1 genes)
Beta vulgaris (1 genes)
Brassica oleracea (1 genes)
Brassica rapa (1 genes)
Cajanus cajan (5 genes)
Capsella rubella (1 genes)
Capsicum annuum (9 genes)
Carica papaya (4 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum (1 genes)
Citrullus lanatus (2 genes)
Citrus clementina (1 genes)
Coffea canephora (2 genes)
Corchorus olitorius (2 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (1 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Fragaria vesca (1 genes)
Glycine max (2 genes)
Gossypium raimondii (1 genes)
Hevea brasiliensis (1 genes)
Malus domestica (5 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (1 genes)
Micromonas commoda (0 genes)
Nelumbo nucifera (2 genes)
Oryza sativa ssp. japonica (1 genes)
Petunia axillaris (3 genes)
Physcomitrium patens (6 genes)
Picea abies (2 genes)
Populus trichocarpa (2 genes)
Prunus persica (2 genes)
Pyrus bretschneideri (1 genes)
Ricinus communis (1 genes)
Schrenkiella parvula (1 genes)
Selaginella moellendorffii (1 genes)
Solanum lycopersicum (3 genes)
Solanum tuberosum (0 genes)
Tarenaya hassleriana (1 genes)
Theobroma cacao (1 genes)
Trifolium pratense (3 genes)
Utricularia gibba (2 genes)
Vigna radiata var. radiata (1 genes)
Vitis vinifera (1 genes)
Zea mays (14 genes)
Ziziphus jujuba (1 genes)

Program Settings