Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Achn246601	Actinidia chinensis	HOM04D008025	ORTHO04D009788	7.3e-60	232.6	118	100.0
Achn168611	Actinidia chinensis	HOM04D008025	ORTHO04D009788	8.1e-27	122.9	83	75.9
Peaxi162Scf00153g01844	Petunia axillaris	HOM04D008025	ORTHO04D009788	5.9e-17	90.1	117	45.3
DCAR_030762	Daucus carota	HOM04D008025	ORTHO04D009788	7.6e-17	89.7	112	48.2
Cc09_g08530	Coffea canephora	HOM04D008025	ORTHO04D009788	1.4e-15	85.5	114	44.7
Cc03_g06320	Coffea canephora	HOM04D008025	ORTHO04D009788	1.4e-15	85.5	114	44.7
RCO.g.30008.000022	Ricinus communis	HOM04D008025	ORTHO04D009788	1.6e-14	82.0	94	43.6
ZJU.LOC107431198	Ziziphus jujuba	HOM04D008025	ORTHO04D009788	1.3e-13	79.0	114	44.7
ZJU.LOC107431197	Ziziphus jujuba	HOM04D008025	ORTHO04D009788	1.3e-13	79.0	114	44.7
Potri.008G172000	Populus trichocarpa	HOM04D008025	ORTHO04D009788	5.1e-13	77.0	93	48.4
Solyc09g090710.2	Solanum lycopersicum	HOM04D008025	ORTHO04D009788	1.1e-12	75.9	120	39.2
Cla021484.g	Citrullus lanatus	HOM04D008025	ORTHO04D009788	1.3e-11	72.4	99	43.4
Potri.010G065666	Populus trichocarpa	HOM04D008025	ORTHO04D009788	6.3e-11	70.1	112	39.3
Migut.G00556	Erythranthe guttata	HOM04D008025	ORTHO04D009788	1.4e-10	68.9	107	41.1
GSVIVG01028417001	Vitis vinifera	HOM04D008025	ORTHO04D009788	1.8e-10	68.6	97	43.3
Cucsa.255810	Cucumis sativus L.	HOM04D008025	ORTHO04D009788	2.4e-10	68.2	92	43.5
NNU_10289	Nelumbo nucifera	HOM04D008025	ORTHO04D009788	3.1e-10	67.8	77	49.4
HBR0349G007	Hevea brasiliensis	HOM04D008025	ORTHO04D009788	2.0e-09	65.1	94	45.7
GSVIVG01027916001	Vitis vinifera	HOM04D008025	ORTHO04D009788	2.6e-09	64.7	82	45.1
Pbr033115.1.g	Pyrus bretschneideri	HOM04D008025	ORTHO04D009788	2.6e-09	64.7	90	45.6
MDO.mRNA.g.687.6	Malus domestica	HOM04D008025	ORTHO04D009788	4.5e-09	63.9	97	43.3
Vradi0169s00210	Vigna radiata var. radiata	HOM04D011415	ORTHO04D009788	1.0e-08	62.8	99	42.4
FVE27882	Fragaria vesca	HOM04D008025	ORTHO04D009788	1.3e-08	62.4	104	43.3
Prupe.1G048400	Prunus persica	HOM04D008025	ORTHO04D009788	1.1e-07	59.3	99	41.4
Vradi08g15400	Vigna radiata var. radiata	HOM04D011415	ORTHO04D009788	3.2e-07	57.8	106	40.6
Araip.EJ0FC	Arachis ipaensis	HOM04D011415	ORTHO04D009788	3.2e-07	57.8	111	36.0
HBR2145G092	Hevea brasiliensis	HOM04D008025	ORTHO04D009788	2.1e-06	55.1	108	37.0
Medtr1g073260	Medicago truncatula	HOM04D011415	ORTHO04D009788	6.1e-06	53.5	104	41.3
Potri.014G192701	Populus trichocarpa	HOM04D008025	ORTHO04D009788	7.9e-06	53.1	59	50.8

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment