Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Achn188561	Actinidia chinensis	HOM04D005814	ORTHO04D008145	3.9e-94	347.1	172	100.0
Achn244211	Actinidia chinensis	HOM04D005814	ORTHO04D008145	4.6e-47	190.7	351	41.0
HBR2687G027	Hevea brasiliensis	HOM04D005814	ORTHO04D008145	7.9e-47	189.9	312	41.7
ZJU.LOC107429847	Ziziphus jujuba	HOM04D005814	ORTHO04D008145	1.1e-45	186.0	351	39.3
COL.COLO4_34475	Corchorus olitorius	HOM04D005814	ORTHO04D008145	1.3e-44	182.6	351	39.6
Gorai.008G247200	Gossypium raimondii	HOM04D005814	ORTHO04D008145	1.6e-44	182.2	350	39.4
Cc08_g14820	Coffea canephora	HOM04D005814	ORTHO04D008145	1.4e-43	179.1	351	37.9
Cpa.g.sc74.56	Carica papaya	HOM04D005814	ORTHO04D008145	1.4e-43	179.1	351	38.5
Ciclev10018956m.g	Citrus clementina	HOM04D005814	ORTHO04D008145	1.4e-43	179.1	351	39.0
CAN.G774.53	Capsicum annuum	HOM04D005814	ORTHO04D008145	3.1e-43	177.9	351	38.2
NNU_16311	Nelumbo nucifera	HOM04D005814	ORTHO04D008145	3.1e-43	177.9	351	38.7
PGSC0003DMG402012338	Solanum tuberosum	HOM04D005814	ORTHO04D008145	5.3e-43	177.2	351	37.9
Solyc08g081170.2	Solanum lycopersicum	HOM04D005814	ORTHO04D008145	5.3e-43	177.2	351	37.9
Prupe.5G101100	Prunus persica	HOM04D005814	ORTHO04D008145	6.9e-43	176.8	351	38.7
Peaxi162Scf00119g01015	Petunia axillaris	HOM04D005814	ORTHO04D008145	9.1e-43	176.4	351	37.9
RCO.g.30190.000462	Ricinus communis	HOM04D005814	ORTHO04D008145	1.5e-42	175.6	352	37.5
TCA.TCM_016268	Theobroma cacao	HOM04D005814	ORTHO04D008145	1.5e-42	175.6	351	38.7
Migut.E01089	Erythranthe guttata	HOM04D005814	ORTHO04D008145	2.0e-42	175.3	351	38.5
Pbr041340.1.g	Pyrus bretschneideri	HOM04D005814	ORTHO04D008145	2.0e-42	175.3	351	38.7
C.cajan_11549.g	Cajanus cajan	HOM04D005814	ORTHO04D008145	4.5e-42	174.1	298	41.6
FVE32500	Fragaria vesca	HOM04D005814	ORTHO04D008145	2.9e-41	171.4	349	37.8
Manes.02G019800	Manihot esculenta	HOM04D005814	ORTHO04D008145	1.9e-40	168.7	351	36.8
Eucgr.D01840	Eucalyptus grandis	HOM04D005814	ORTHO04D008145	2.5e-40	168.3	351	38.2
AH016153	Amaranthus hypochondriacus	HOM04D005814	ORTHO04D008145	4.2e-40	167.5	351	36.5
Potri.001G103300	Populus trichocarpa	HOM04D005814	ORTHO04D008145	4.2e-40	167.5	351	36.8
Bv6_137540_ixie	Beta vulgaris	HOM04D005814	ORTHO04D008145	1.2e-39	166.0	351	36.5
THA.LOC104823588	Tarenaya hassleriana	HOM04D005814	ORTHO04D008145	2.1e-39	165.2	351	36.8
MELO3C005683	Cucumis melo	HOM04D005814	ORTHO04D008145	3.6e-39	164.5	349	36.4
Cla011439.g	Citrullus lanatus	HOM04D005814	ORTHO04D008145	3.6e-39	164.5	349	36.4
DCAR_000617	Daucus carota	HOM04D005814	ORTHO04D008145	1.0e-38	162.9	351	36.8
Cucsa.303230	Cucumis sativus L.	HOM04D005814	ORTHO04D008145	1.8e-38	162.2	349	36.1
Pbr018176.1.g	Pyrus bretschneideri	HOM04D005814	ORTHO04D008145	2.3e-38	161.8	370	36.5
Araip.L03GB	Arachis ipaensis	HOM04D005814	ORTHO04D008145	3.0e-38	161.4	342	37.1
ATR0680G162	Amborella trichopoda	HOM04D005814	ORTHO04D008145	8.8e-38	159.8	351	35.9
AUR62007990	Chenopodium quinoa	HOM04D005814	ORTHO04D008145	1.1e-37	159.5	351	35.6
GSVIVG01019746001	Vitis vinifera	HOM04D005814	ORTHO04D008145	1.5e-37	159.1	271	41.0
Glyma.08G015200	Glycine max	HOM04D005814	ORTHO04D008145	2.0e-37	158.7	344	36.9
Ca_05753.g	Cicer arietinum	HOM04D005814	ORTHO04D008145	2.6e-37	158.3	346	36.1
AUR62003173	Chenopodium quinoa	HOM04D005814	ORTHO04D008145	3.3e-37	157.9	351	35.3
TPR.G12960	Trifolium pratense	HOM04D005814	ORTHO04D008145	7.4e-37	156.8	346	35.8
Tp2g00970	Schrenkiella parvula	HOM04D005814	ORTHO04D008145	3.7e-36	154.5	353	35.1
Glyma.05G208600	Glycine max	HOM04D005814	ORTHO04D008145	4.8e-36	154.1	344	36.0
Bo9g029280	Brassica oleracea	HOM04D005814	ORTHO04D008145	8.2e-36	153.3	352	34.9
Medtr8g098345	Medicago truncatula	HOM04D005814	ORTHO04D008145	8.2e-36	153.3	346	35.5
Brara.I01248	Brassica rapa	HOM04D005814	ORTHO04D008145	1.8e-35	152.1	353	34.8
AT1G63680	Arabidopsis thaliana	HOM04D005814	ORTHO04D008145	2.4e-35	151.8	353	34.6
AL2G11550	Arabidopsis lyrata	HOM04D005814	ORTHO04D008145	3.1e-35	151.4	353	34.6
Gorai.003G158300	Gossypium raimondii	HOM04D005814	ORTHO04D008145	6.9e-35	150.2	352	34.7
Carubv10021912m.g	Capsella rubella	HOM04D005814	ORTHO04D008145	1.2e-34	149.4	353	34.0
UGI.Scf00001.312	Utricularia gibba	HOM04D005814	ORTHO04D008145	1.5e-34	149.1	351	34.8
Mapoly0091s0082	Marchantia polymorpha	HOM04D005814	ORTHO04D008145	2.6e-34	148.3	351	34.2
Vradi07g30640	Vigna radiata var. radiata	HOM04D005814	ORTHO04D008145	1.7e-33	145.6	344	34.6
Pp3c24_18820	Physcomitrium patens	HOM04D005814	ORTHO04D008145	5.5e-32	140.6	355	32.7
Zm00001d047128	Zea mays	HOM04D005814	ORTHO04D008145	1.2e-31	139.4	192	43.2
LOC_Os10g40130	Oryza sativa ssp. japonica	HOM04D005814	ORTHO04D008145	2.3e-30	135.2	190	42.1
SMO147G0132	Selaginella moellendorffii	HOM04D005814	ORTHO04D008145	1.5e-29	132.5	348	32.2
Pp3c23_15810	Physcomitrium patens	HOM04D005814	ORTHO04D008145	6.3e-28	127.1	351	31.1
PAB00064689	Picea abies	HOM04D005814	ORTHO04D008145	9.7e-21	103.2	275	32.0
MDO.mRNA.g.9115.1	Malus domestica	HOM04D005814	ORTHO04D008145	3.5e-18	94.7	94	57.4
MCO12G378	Micromonas commoda	HOM04D005814	ORTHO04D008145	1.4e-06	56.2	94	39.4

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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