Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Achn133181	Actinidia chinensis	HOM04D006989	ORTHO04D008961	9.7e-72	272.3	137	100.0
GSVIVG01020855001	Vitis vinifera	HOM04D006989	ORTHO04D008961	2.1e-26	121.7	132	50.8
Prupe.3G174900	Prunus persica	HOM04D006989	ORTHO04D008961	4.1e-22	107.5	145	44.1
Cc05_g09660	Coffea canephora	HOM04D006989	ORTHO04D008961	9.2e-22	106.3	139	41.7
NNU_03568	Nelumbo nucifera	HOM04D006989	ORTHO04D008961	5.9e-21	103.6	127	45.7
FVE28730	Fragaria vesca	HOM04D006989	ORTHO04D008961	5.0e-20	100.5	143	41.3
ZJU.LOC107416120	Ziziphus jujuba	HOM04D006989	ORTHO04D008961	2.5e-19	98.2	143	43.4
COL.COLO4_08458	Corchorus olitorius	HOM04D006989	ORTHO04D008961	3.3e-19	97.8	140	45.0
Pbr002393.1.g	Pyrus bretschneideri	HOM04D006989	ORTHO04D008961	5.6e-19	97.1	144	40.3
Potri.002G058800	Populus trichocarpa	HOM04D006989	ORTHO04D008961	5.6e-19	97.1	138	44.9
CAN.G164.20	Capsicum annuum	HOM04D006989	ORTHO04D008961	1.4e-17	92.4	136	40.4
FVE28727	Fragaria vesca	HOM04D006989	ORTHO04D008961	2.3e-17	91.7	131	42.7
Solyc12g011190.1	Solanum lycopersicum	HOM04D006989	ORTHO04D008961	4.0e-17	90.9	131	42.7
Ciclev10032332m.g	Citrus clementina	HOM04D006989	ORTHO04D008961	8.9e-17	89.7	143	42.7
TCA.TCM_001889	Theobroma cacao	HOM04D006989	ORTHO04D008961	1.2e-16	89.4	142	43.0
PGSC0003DMG400007847	Solanum tuberosum	HOM04D006989	ORTHO04D008961	1.2e-16	89.4	137	38.7
Cpa.g.sc50.98	Carica papaya	HOM04D006989	ORTHO04D008961	3.7e-15	84.3	145	43.4
Peaxi162Scf00789g00013	Petunia axillaris	HOM04D006989	ORTHO04D008961	1.1e-14	82.8	136	36.8
Araip.XHY4U	Arachis ipaensis	HOM04D006989	ORTHO04D008961	1.1e-14	82.8	139	42.4
Glyma.08G308800	Glycine max	HOM04D006989	ORTHO04D008961	3.2e-14	81.3	140	37.1
C.cajan_26590.g	Cajanus cajan	HOM04D006989	ORTHO04D008961	7.0e-14	80.1	141	38.3
Vradi0165s00020	Vigna radiata var. radiata	HOM04D006989	ORTHO04D008961	9.2e-14	79.7	140	37.1
DCAR_013319	Daucus carota	HOM04D006989	ORTHO04D008961	1.2e-13	79.3	116	39.7
Gorai.012G040100	Gossypium raimondii	HOM04D006989	ORTHO04D008961	7.8e-13	76.6	131	38.9
AUR62000092	Chenopodium quinoa	HOM04D006989	ORTHO04D008961	1.0e-12	76.3	143	39.9
Medtr3g047590	Medicago truncatula	HOM04D006989	ORTHO04D008961	1.3e-12	75.9	140	35.7
Eucgr.A01992	Eucalyptus grandis	HOM04D006989	ORTHO04D008961	1.7e-12	75.5	138	36.2
Ca_22807.g	Cicer arietinum	HOM04D006989	ORTHO04D008961	2.3e-12	75.1	144	36.8
TPR.G16762	Trifolium pratense	HOM04D006989	ORTHO04D008961	6.6e-12	73.6	140	34.3
Migut.M00569	Erythranthe guttata	HOM04D006989	ORTHO04D008961	1.9e-11	72.0	122	37.7
Cla005513.g	Citrullus lanatus	HOM04D006989	ORTHO04D008961	4.3e-11	70.9	138	38.4
Glyma.18G107800	Glycine max	HOM04D006989	ORTHO04D008961	4.3e-11	70.9	140	32.9
THA.LOC104800828	Tarenaya hassleriana	HOM04D006989	ORTHO04D008961	4.3e-11	70.9	131	37.4
Bv4_072260_cjxc	Beta vulgaris	HOM04D006989	ORTHO04D008961	1.2e-10	69.3	137	38.7
ATR0757G094	Amborella trichopoda	HOM04D006989	ORTHO04D008961	2.1e-10	68.6	140	35.7
Eucgr.A02009	Eucalyptus grandis	HOM04D006989	ORTHO04D008961	2.8e-10	68.2	127	37.8
Eucgr.A01996	Eucalyptus grandis	HOM04D006989	ORTHO04D008961	2.3e-09	65.1	126	37.3
Tp1g05260	Schrenkiella parvula	HOM04D006989	ORTHO04D008961	3.1e-09	64.7	126	38.1
MDO.mRNA.g.411.4	Malus domestica	HOM04D006989	ORTHO04D008961	3.1e-09	64.7	92	42.4
Bo8g114570	Brassica oleracea	HOM04D000217	ORTHO04D000142	6.8e-09	63.5	106	43.4
UGI.Scf00187.10922	Utricularia gibba	HOM04D006989	ORTHO04D008961	5.8e-08	60.5	130	30.0
Carubv10010938m.g	Capsella rubella	HOM04D006989	ORTHO04D008961	9.8e-08	59.7	129	37.2
AL1G16520	Arabidopsis lyrata	HOM04D006989	ORTHO04D008961	9.8e-08	59.7	126	32.5
THA.LOC104827393	Tarenaya hassleriana	HOM04D006989	ORTHO04D008961	1.3e-07	59.3	106	39.6
AT1G06500	Arabidopsis thaliana	HOM04D006989	ORTHO04D008961	6.4e-07	57.0	126	31.7
PAB00028142	Picea abies	HOM04D006989	ORTHO04D008961	1.4e-06	55.8	161	29.2
Brara.I05406	Brassica rapa	HOM04D006989	ORTHO04D008961	1.9e-06	55.5	127	32.3

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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