Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Achn009071	Actinidia chinensis	HOM04D002321	ORTHO04D002274	4.4e-96	353.6	182	100.0
Achn385541	Actinidia chinensis	HOM04D002321	ORTHO04D002274	4.7e-58	227.3	174	70.7
Achn009061	Actinidia chinensis	HOM04D002321	ORTHO04D018408	2.1e-50	201.8	175	66.3
Eucgr.F03313	Eucalyptus grandis	HOM04D002321	ORTHO04D002274	5.7e-11	70.9	190	31.6
NNU_11130	Nelumbo nucifera	HOM04D002321	ORTHO04D002274	3.7e-10	68.2	243	28.0
Potri.011G119700	Populus trichocarpa	HOM04D002321	ORTHO04D002274	3.1e-09	65.1	191	27.2
GSVIVG01014330001	Vitis vinifera	HOM04D002321	ORTHO04D002274	5.3e-09	64.3	189	29.6
NNU_25978	Nelumbo nucifera	HOM04D002321	ORTHO04D002274	1.5e-08	62.8	243	27.2
TCA.TCM_031520	Theobroma cacao	HOM04D002321	ORTHO04D002274	1.5e-08	62.8	187	29.4
RCO.g.28469.000004	Ricinus communis	HOM04D002321	ORTHO04D002274	4.5e-08	61.2	173	27.2
Ca_06863.g	Cicer arietinum	HOM04D002321	ORTHO04D002274	1.3e-07	59.7	173	29.5
Glyma.06G240500	Glycine max	HOM04D002321	ORTHO04D002274	2.2e-07	58.9	179	26.8
Achn163511	Actinidia chinensis	HOM04D002321	ORTHO04D002274	2.9e-07	58.5	189	26.5
ATR0737G090	Amborella trichopoda	HOM04D002321	ORTHO04D002274	3.8e-07	58.2	189	25.4
Medtr4g132200	Medicago truncatula	HOM04D002321	ORTHO04D002274	5.0e-07	57.8	173	26.0
Eucgr.F01145	Eucalyptus grandis	HOM04D002321	ORTHO04D002274	5.0e-07	57.8	181	27.1
Araip.V1CQ7	Arachis ipaensis	HOM04D002321	ORTHO04D002274	5.0e-07	57.8	171	28.1
HBR1975G006	Hevea brasiliensis	HOM04D002321	ORTHO04D002274	6.5e-07	57.4	180	26.1
Glyma.12G224800	Glycine max	HOM04D002321	ORTHO04D002274	8.5e-07	57.0	173	28.3
Gorai.009G387800	Gossypium raimondii	HOM04D002321	ORTHO04D002274	1.1e-06	56.6	176	26.1
Gorai.013G168900	Gossypium raimondii	HOM04D002321	ORTHO04D002274	1.4e-06	56.2	219	27.4
Gorai.009G386800	Gossypium raimondii	HOM04D002321	ORTHO04D002274	1.9e-06	55.8	187	25.1
C.cajan_13857.g	Cajanus cajan	HOM04D002321	ORTHO04D002274	2.5e-06	55.5	173	27.2
Glyma.13G276500	Glycine max	HOM04D002321	ORTHO04D002274	2.5e-06	55.5	173	27.7
Medtr2g085330	Medicago truncatula	HOM04D002321	ORTHO04D002274	2.5e-06	55.5	173	27.2
Cucsa.123120	Cucumis sativus L.	HOM04D002321	ORTHO04D002274	3.2e-06	55.1	179	27.4
Cla023382.g	Citrullus lanatus	HOM04D002321	ORTHO04D002274	3.2e-06	55.1	179	27.4
Cpa.g.sc80.67	Carica papaya	HOM04D002321	ORTHO04D002274	4.2e-06	54.7	171	26.9
Cc05_g11980	Coffea canephora	HOM04D002321	ORTHO04D002274	5.5e-06	54.3	188	25.5
Achn133511	Actinidia chinensis	HOM04D002321	ORTHO04D002274	7.2e-06	53.9	174	25.9
PAB00006032	Picea abies	HOM04D002321	ORTHO04D002274	7.2e-06	53.9	183	25.7
Manes.15G087400	Manihot esculenta	HOM04D002321	ORTHO04D002274	7.2e-06	53.9	248	23.8

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment