Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
AUR62041862	Chenopodium quinoa	HOM04D007051	ORTHO04D009177	2.1e-65	251.1	123	100.0
AUR62038352	Chenopodium quinoa	HOM04D007051	ORTHO04D009177	8.4e-59	229.2	115	97.4
Achn007321	Actinidia chinensis	HOM04D007051	ORTHO04D009177	9.6e-47	189.1	116	75.9
Cc02_g07990	Coffea canephora	HOM04D007051	ORTHO04D009177	2.8e-46	187.6	115	73.0
AH023452	Amaranthus hypochondriacus	HOM04D007051	ORTHO04D009177	1.4e-45	185.3	115	73.9
GSVIVG01016535001	Vitis vinifera	HOM04D007051	ORTHO04D009177	4.1e-45	183.7	115	73.0
Migut.F01500	Erythranthe guttata	HOM04D007051	ORTHO04D009177	3.4e-44	180.6	116	70.7
TCA.TCM_042786	Theobroma cacao	HOM04D007051	ORTHO04D009177	7.6e-44	179.5	112	72.3
Peaxi162Scf00658g00728	Petunia axillaris	HOM04D007051	ORTHO04D009177	1.0e-43	179.1	114	71.9
RCO.g.29887.000005	Ricinus communis	HOM04D007051	ORTHO04D009177	1.7e-43	178.3	114	70.2
Pbr032360.1.g	Pyrus bretschneideri	HOM04D007051	ORTHO04D009177	3.8e-43	177.2	115	70.4
Potri.010G205900	Populus trichocarpa	HOM04D007051	ORTHO04D009177	1.1e-42	175.6	115	71.3
Manes.07G114900	Manihot esculenta	HOM04D007051	ORTHO04D009177	2.5e-42	174.5	112	71.4
Ciclev10032197m.g	Citrus clementina	HOM04D007051	ORTHO04D009177	3.2e-42	174.1	114	69.3
ZJU.LOC107413528	Ziziphus jujuba	HOM04D007051	ORTHO04D009177	3.2e-42	174.1	114	69.3
Vradi04g10740	Vigna radiata var. radiata	HOM04D007051	ORTHO04D009177	4.2e-42	173.7	114	68.4
Prupe.2G233400	Prunus persica	HOM04D007051	ORTHO04D009177	5.5e-42	173.3	115	69.6
FVE26633	Fragaria vesca	HOM04D007051	ORTHO04D009177	5.5e-42	173.3	114	67.5
DCAR_027635	Daucus carota	HOM04D007051	ORTHO04D009177	7.2e-42	172.9	115	69.6
Glyma.18G289500	Glycine max	HOM04D007051	ORTHO04D009177	9.3e-42	172.6	114	68.4
C.cajan_25875.g	Cajanus cajan	HOM04D007051	ORTHO04D009177	1.6e-41	171.8	114	69.3
Cla004678.g	Citrullus lanatus	HOM04D007051	ORTHO04D009177	2.7e-41	171.0	114	68.4
Ca_21027.g	Cicer arietinum	HOM04D007051	ORTHO04D009177	1.8e-40	168.3	114	65.8
Gorai.011G257200	Gossypium raimondii	HOM04D007051	ORTHO04D009177	2.3e-40	167.9	112	67.9
Eucgr.J00020	Eucalyptus grandis	HOM04D007051	ORTHO04D009177	6.7e-40	166.4	114	64.0
Medtr7g024560	Medicago truncatula	HOM04D007051	ORTHO04D009177	1.5e-39	165.2	114	64.0
MELO3C021650	Cucumis melo	HOM04D007051	ORTHO04D009177	1.1e-37	159.1	114	63.2
Cucsa.010670	Cucumis sativus L.	HOM04D007051	ORTHO04D009177	1.4e-37	158.7	114	63.2
TPR.G15525	Trifolium pratense	HOM04D007051	ORTHO04D009177	4.1e-37	157.1	114	62.3
COL.COLO4_14997	Corchorus olitorius	HOM04D007051	ORTHO04D009177	1.3e-35	152.1	139	54.7
UGI.Scf00066.6132	Utricularia gibba	HOM04D007051	ORTHO04D009177	1.2e-33	145.6	95	71.6
Brara.E03472	Brassica rapa	HOM04D007051	ORTHO04D009177	4.6e-33	143.7	115	56.5
Bo5g148450	Brassica oleracea	HOM04D007051	ORTHO04D009177	4.6e-33	143.7	115	56.5
AL3G13930	Arabidopsis lyrata	HOM04D007051	ORTHO04D009177	4.6e-33	143.7	116	54.3
Tp3g03000	Schrenkiella parvula	HOM04D007051	ORTHO04D009177	1.8e-32	141.7	115	56.5
Carubv10014253m.g	Capsella rubella	HOM04D007051	ORTHO04D009177	1.1e-31	139.0	115	53.0
THA.LOC104799346	Tarenaya hassleriana	HOM04D007051	ORTHO04D009177	2.0e-31	138.3	115	54.8
ATR0559G284	Amborella trichopoda	HOM04D007051	ORTHO04D009177	3.7e-30	134.0	101	59.4
Zm00001d028631	Zea mays	HOM04D007051	ORTHO04D009177	4.1e-29	130.6	111	55.9
LOC_Os03g16870	Oryza sativa ssp. japonica	HOM04D007051	ORTHO04D009177	1.3e-27	125.6	115	53.9
Zm00001d048259	Zea mays	HOM04D007051	ORTHO04D009177	6.3e-22	106.7	91	53.8
CAN.G1401.1	Capsicum annuum	HOM04D007051	ORTHO04D009177	2.4e-21	104.8	63	73.0
Solyc06g043060.1	Solanum lycopersicum	HOM04D007051	ORTHO04D009177	9.1e-21	102.8	67	67.2
Pp3c12_11030	Physcomitrium patens	HOM04D007051	ORTHO04D009177	3.6e-17	90.9	107	38.3
Bv2_037580_kgso	Beta vulgaris	HOM04D007051	ORTHO04D009177	2.2e-14	81.6	46	84.8
Cpa.g.sc1.397	Carica papaya	HOM04D007051	ORTHO04D009177	4.5e-12	73.9	48	72.9
Solyc06g043070.2	Solanum lycopersicum	HOM04D007051	ORTHO04D009177	3.2e-10	67.8	49	61.2
AT3G04020	Arabidopsis thaliana	HOM04D007051	ORTHO04D009177	2.7e-09	64.7	50	52.0

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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