Dicots PLAZA 4.5 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
AT3G51580	Arabidopsis thaliana	HOM04D004182	ORTHO04D004911	9.1e-192	672.5	382	100.0
AL5G32020	Arabidopsis lyrata	HOM04D004182	ORTHO04D004911	3.5e-159	564.3	382	82.5
Carubv10017424m.g	Capsella rubella	HOM04D004182	ORTHO04D004911	1.2e-111	406.4	382	67.8
Tp5g10690	Schrenkiella parvula	HOM04D004182	ORTHO04D004911	1.0e-97	360.1	357	62.7
Brara.C04369	Brassica rapa	HOM04D004182	ORTHO04D004911	1.4e-86	323.2	260	71.9
Bo7g100990	Brassica oleracea	HOM04D004182	ORTHO04D004911	1.2e-85	320.1	261	71.3
THA.LOC104806162	Tarenaya hassleriana	HOM04D004182	ORTHO04D004911	2.5e-80	302.4	405	55.3
Ciclev10011425m.g	Citrus clementina	HOM04D004182	ORTHO04D004911	4.4e-45	185.3	222	53.2
Brara.A02081	Brassica rapa	HOM04D004182	ORTHO04D004911	3.7e-44	182.2	181	61.9
Gorai.011G127100	Gossypium raimondii	HOM04D004182	ORTHO04D004911	2.1e-42	176.4	403	36.0
HBR1198G022	Hevea brasiliensis	HOM04D004182	ORTHO04D004911	1.3e-41	173.7	393	35.9
HBR3093G043	Hevea brasiliensis	HOM04D004182	ORTHO04D004911	2.5e-40	169.5	389	36.0
Manes.09G118000	Manihot esculenta	HOM04D004182	ORTHO04D004911	2.8e-39	166.0	393	38.9
RCO.g.29915.000009	Ricinus communis	HOM04D004182	ORTHO04D004911	3.6e-39	165.6	387	37.0
Eucgr.A00727	Eucalyptus grandis	HOM04D004182	ORTHO04D004911	1.3e-36	157.1	216	46.3
TCA.TCM_019697	Theobroma cacao	HOM04D004182	ORTHO04D004911	8.4e-36	154.5	218	45.9
Potri.016G136900	Populus trichocarpa	HOM04D004182	ORTHO04D004911	7.1e-35	151.4	251	38.6
Prupe.6G293800	Prunus persica	HOM04D004182	ORTHO04D004911	1.6e-34	150.2	204	49.0
Achn342311	Actinidia chinensis	HOM04D004182	ORTHO04D004911	3.9e-33	145.6	227	44.5
Potri.006G108400	Populus trichocarpa	HOM04D004182	ORTHO04D004911	5.1e-33	145.2	222	44.1
ZJU.LOC107431075	Ziziphus jujuba	HOM04D004182	ORTHO04D004911	6.6e-33	144.8	244	44.7
Gorai.005G004100	Gossypium raimondii	HOM04D004182	ORTHO04D004911	3.3e-32	142.5	400	37.5
Peaxi162Scf00732g00259	Petunia axillaris	HOM04D004182	ORTHO04D004911	2.8e-31	139.4	216	45.4
NNU_24392	Nelumbo nucifera	HOM04D004182	ORTHO04D004911	8.1e-31	137.9	233	40.8
FVE13882	Fragaria vesca	HOM04D004182	ORTHO04D004911	1.8e-30	136.7	251	42.6
Pbr014642.1.g	Pyrus bretschneideri	HOM04D004182	ORTHO04D004911	5.3e-30	135.2	215	47.4
Glyma.18G213700	Glycine max	HOM04D004182	ORTHO04D004911	3.4e-29	132.5	230	42.2
Cpa.g.sc86.55	Carica papaya	HOM04D004182	ORTHO04D004911	1.3e-28	130.6	179	49.7
C.cajan_32599.g	Cajanus cajan	HOM04D004182	ORTHO04D004911	1.3e-28	130.6	232	42.2
Glyma.09G274700	Glycine max	HOM04D004182	ORTHO04D004911	1.6e-26	123.6	216	41.7
GSVIVG01030180001	Vitis vinifera	HOM04D004182	ORTHO04D004911	2.1e-26	123.2	258	38.4
Vradi04g05520	Vigna radiata var. radiata	HOM04D004182	ORTHO04D004911	7.9e-26	121.3	223	39.0
Bv7_156950_myof	Beta vulgaris	HOM04D004182	ORTHO04D004911	1.0e-25	120.9	214	40.2
Araip.CN1AG	Arachis ipaensis	HOM04D004182	ORTHO04D004911	2.3e-25	119.8	226	39.8
PGSC0003DMG400026790	Solanum tuberosum	HOM04D004182	ORTHO04D004911	6.6e-25	118.2	252	38.9
Medtr7g073280	Medicago truncatula	HOM04D004182	ORTHO04D004911	2.5e-24	116.3	219	38.8
Solyc09g015530.2	Solanum lycopersicum	HOM04D004182	ORTHO04D004911	4.3e-24	115.5	224	42.0
DCAR_028921	Daucus carota	HOM04D004182	ORTHO04D004911	9.6e-24	114.4	249	38.6
Cla016424.g	Citrullus lanatus	HOM04D004182	ORTHO04D004911	1.4e-22	110.5	216	31.9
Eucgr.G03139	Eucalyptus grandis	HOM04D004182	ORTHO04D004911	2.4e-22	109.8	268	34.7
TPR.G14123	Trifolium pratense	HOM04D004182	ORTHO04D004911	3.1e-22	109.4	262	35.1
MDO.mRNA.g.1834.24	Malus domestica	HOM04D004182	ORTHO04D004911	3.1e-22	109.4	122	50.8
Cucsa.325980	Cucumis sativus L.	HOM04D004182	ORTHO04D004911	5.3e-22	108.6	215	31.6
Migut.J00036	Erythranthe guttata	HOM04D004182	ORTHO04D004911	2.0e-21	106.7	257	36.2
Peaxi162Scf00167g01218	Petunia axillaris	HOM04D004182	ORTHO04D004911	4.2e-19	99.0	210	40.5
Ca_09489.g	Cicer arietinum	HOM04D004182	ORTHO04D004911	9.3e-19	97.8	149	45.6
Achn148341	Actinidia chinensis	HOM04D004182	ORTHO04D004911	1.6e-18	97.1	192	38.5
Ciclev10032400m.g	Citrus clementina	HOM04D004182	ORTHO04D004911	4.6e-18	95.5	205	31.2
AUR62029766	Chenopodium quinoa	HOM04D004182	ORTHO04D004911	1.3e-17	94.0	267	33.7
AUR62006418	Chenopodium quinoa	HOM04D004182	ORTHO04D004911	8.7e-17	91.3	397	29.2
Cpa.g.sc19.55	Carica papaya	HOM04D004182	ORTHO04D004911	1.9e-16	90.1	201	29.9
Solyc05g052210.2	Solanum lycopersicum	HOM04D004182	ORTHO04D004911	2.5e-16	89.7	154	35.1
LOC_Os05g40040	Oryza sativa ssp. japonica	HOM04D004182	ORTHO04D004911	4.3e-16	89.0	218	36.2
Cc02_g05350	Coffea canephora	HOM04D004182	ORTHO04D004911	5.6e-16	88.6	177	31.6
TCA.TCM_045493	Theobroma cacao	HOM04D004182	ORTHO04D004911	5.6e-16	88.6	215	31.2
PGSC0003DMG400011643	Solanum tuberosum	HOM04D004182	ORTHO04D004911	9.6e-16	87.8	204	35.8
Manes.08G171100	Manihot esculenta	HOM04D004182	ORTHO04D004911	2.1e-15	86.7	250	32.4
PAB00041169	Picea abies	HOM04D004182	ORTHO04D004911	1.4e-14	84.0	195	37.4
HBR0224G013	Hevea brasiliensis	HOM04D004182	ORTHO04D004911	1.4e-14	84.0	209	31.1
Bo1g059080	Brassica oleracea	HOM04D004182	ORTHO04D004911	2.4e-14	83.2	111	50.5
UGI.Scf00682.18309	Utricularia gibba	HOM04D004182	ORTHO04D004911	6.9e-14	81.6	395	26.8
GSVIVG01032671001	Vitis vinifera	HOM04D004182	ORTHO04D004911	9.0e-14	81.3	194	32.5
Manes.10G001600	Manihot esculenta	HOM04D004182	ORTHO04D004911	1.5e-13	80.5	202	31.2
COL.COLO4_06483	Corchorus olitorius	HOM04D004182	ORTHO04D004911	3.4e-13	79.3	140	45.7
RCO.g.29729.000111	Ricinus communis	HOM04D004182	ORTHO04D004911	3.4e-13	79.3	214	29.4
Migut.F01242	Erythranthe guttata	HOM04D004182	ORTHO04D004911	4.5e-13	79.0	185	35.1
MDO.mRNA.g.254.10	Malus domestica	HOM04D004182	ORTHO04D004911	4.9e-12	75.5	90	57.8
DCAR_014664	Daucus carota	HOM04D004182	ORTHO04D004911	2.7e-10	69.7	185	30.8
DCAR_018039	Daucus carota	HOM04D004182	ORTHO04D004911	2.3e-09	66.6	177	29.4
NNU_06255	Nelumbo nucifera	HOM04D004182	ORTHO04D004911	2.5e-08	63.2	82	42.7
Manes.S044800	Manihot esculenta	HOM04D007591	ORTHO04D009774	3.3e-08	62.8	241	26.6
COL.COLO4_19418	Corchorus olitorius	HOM04D004182	ORTHO04D004911	9.6e-08	61.2	147	27.2

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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