Dicots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
AH020463	Amaranthus hypochondriacus	HOM04D004522	ORTHO04D005489	5.6e-165	583.2	299	100.0
AH006709	Amaranthus hypochondriacus	HOM04D004522	ORTHO04D005489	5.3e-131	470.3	289	85.5
AUR62030362	Chenopodium quinoa	HOM04D004522	ORTHO04D005489	1.8e-123	445.3	288	81.2
Bv3_062510_jyce	Beta vulgaris	HOM04D004522	ORTHO04D005489	6.9e-123	443.4	288	81.2
AUR62040845	Chenopodium quinoa	HOM04D004522	ORTHO04D005489	4.3e-117	424.1	288	79.5
DCAR_020545	Daucus carota	HOM04D004522	ORTHO04D005489	7.9e-111	403.3	285	73.7
ZJU.LOC107431678	Ziziphus jujuba	HOM04D004522	ORTHO04D005489	1.8e-107	392.1	287	70.4
ZJU.LOC107433796	Ziziphus jujuba	HOM04D004522	ORTHO04D005489	1.8e-107	392.1	287	70.4
Migut.K00123	Erythranthe guttata	HOM04D004522	ORTHO04D005489	2.4e-107	391.7	287	71.1
PGSC0003DMG400010441	Solanum tuberosum	HOM04D004522	ORTHO04D005489	2.0e-106	388.7	283	72.1
FVE21897	Fragaria vesca	HOM04D004522	ORTHO04D005489	1.3e-105	386.0	288	68.8
Prupe.7G045500	Prunus persica	HOM04D004522	ORTHO04D005489	1.7e-105	385.6	288	68.1
HBR0807G028	Hevea brasiliensis	HOM04D004522	ORTHO04D005489	2.2e-105	385.2	288	69.8
Pbr040411.1.g	Pyrus bretschneideri	HOM04D004522	ORTHO04D005489	1.4e-104	382.5	288	67.0
TCA.TCM_024404	Theobroma cacao	HOM04D004522	ORTHO04D005489	1.9e-104	382.1	289	69.6
Solyc02g068640.2	Solanum lycopersicum	HOM04D004522	ORTHO04D005489	1.9e-104	382.1	284	70.8
NNU_15496	Nelumbo nucifera	HOM04D004522	ORTHO04D005489	2.5e-104	381.7	284	69.7
Cpa.g.sc49.96	Carica papaya	HOM04D004522	ORTHO04D005489	1.2e-103	379.4	288	67.7
Cla004999.g	Citrullus lanatus	HOM04D004522	ORTHO04D005489	6.1e-103	377.1	288	69.8
Ciclev10005607m.g	Citrus clementina	HOM04D004522	ORTHO04D005489	7.9e-103	376.7	284	70.4
COL.COLO4_33945	Corchorus olitorius	HOM04D004522	ORTHO04D005489	7.9e-103	376.7	289	68.9
Achn136451	Actinidia chinensis	HOM04D004522	ORTHO04D005489	3.9e-102	374.4	285	68.8
MELO3C019039	Cucumis melo	HOM04D004522	ORTHO04D005489	1.1e-101	372.9	288	68.8
Cucsa.018280	Cucumis sativus L.	HOM04D004522	ORTHO04D005489	1.1e-101	372.9	288	68.8
Potri.006G042600	Populus trichocarpa	HOM04D004522	ORTHO04D005489	1.1e-101	372.9	284	68.7
Glyma.03G129100	Glycine max	HOM04D004522	ORTHO04D005489	1.5e-101	372.5	288	66.7
Peaxi162Scf00149g00116	Petunia axillaris	HOM04D004522	ORTHO04D005489	1.5e-101	372.5	295	68.8
Gorai.001G029600	Gossypium raimondii	HOM04D004522	ORTHO04D005489	1.5e-101	372.5	289	67.5
THA.LOC104816595	Tarenaya hassleriana	HOM04D004522	ORTHO04D005489	3.3e-101	371.3	291	67.4
Ca_07181.g	Cicer arietinum	HOM04D004522	ORTHO04D005489	9.7e-101	369.8	287	66.9
Glyma.19G131500	Glycine max	HOM04D004522	ORTHO04D005489	1.7e-100	369.0	288	67.4
Tp6g29240	Schrenkiella parvula	HOM04D004522	ORTHO04D005489	2.2e-100	368.6	289	67.8
TPR.G9312	Trifolium pratense	HOM04D004522	ORTHO04D005489	2.8e-100	368.2	288	66.3
AT5G14800	Arabidopsis thaliana	HOM04D004522	ORTHO04D005489	3.7e-100	367.9	289	66.8
AL6G25600	Arabidopsis lyrata	HOM04D004522	ORTHO04D005489	3.7e-100	367.9	289	66.4
RCO.g.29941.000005	Ricinus communis	HOM04D004522	ORTHO04D005489	1.4e-99	365.9	288	66.3
Bo9g165620	Brassica oleracea	HOM04D004522	ORTHO04D005489	5.3e-99	364.0	289	67.1
GSVIVG01033588001	Vitis vinifera	HOM04D004522	ORTHO04D005489	1.2e-98	362.8	286	66.1
Brara.J01994	Brassica rapa	HOM04D004522	ORTHO04D005489	1.5e-98	362.5	289	67.1
Bo3g009940	Brassica oleracea	HOM04D004522	ORTHO04D005489	2.6e-98	361.7	284	67.6
C.cajan_30160.g	Cajanus cajan	HOM04D004522	ORTHO04D005489	7.7e-98	360.1	288	65.6
Vradi0154s00320	Vigna radiata var. radiata	HOM04D004522	ORTHO04D005489	1.3e-97	359.4	288	65.6
Medtr7g090160	Medicago truncatula	HOM04D004522	ORTHO04D005489	2.9e-97	358.2	288	64.6
Brara.C00638	Brassica rapa	HOM04D004522	ORTHO04D005489	4.2e-96	354.4	284	66.5
UGI.Scf00046.4839	Utricularia gibba	HOM04D004522	ORTHO04D005489	2.7e-95	351.7	280	66.1
Araip.68NP6	Arachis ipaensis	HOM04D004522	ORTHO04D005489	2.7e-95	351.7	329	59.0
Cc06_g18620	Coffea canephora	HOM04D004522	ORTHO04D005489	7.4e-93	343.6	267	68.2
Carubv10001677m.g	Capsella rubella	HOM04D004522	ORTHO04D005489	1.7e-92	342.4	289	63.7
Zm00001d042117	Zea mays	HOM04D004522	ORTHO04D005489	7.0e-91	337.0	287	62.0
LOC_Os01g71990	Oryza sativa ssp. japonica	HOM04D004522	ORTHO04D005489	5.5e-88	327.4	291	60.8
ATR0721G010	Amborella trichopoda	HOM04D004522	ORTHO04D005489	1.1e-83	313.2	281	58.0
Pbr040410.1.g	Pyrus bretschneideri	HOM04D004522	ORTHO04D005489	5.9e-82	307.4	284	57.0
Prupe.7G045400	Prunus persica	HOM04D004522	ORTHO04D005489	1.5e-80	302.8	286	54.5
ZJU.LOC107433769	Ziziphus jujuba	HOM04D004522	ORTHO04D005489	3.2e-80	301.6	284	55.6
ZJU.LOC107431667	Ziziphus jujuba	HOM04D004522	ORTHO04D005489	3.2e-80	301.6	284	55.6
Eucgr.K01625	Eucalyptus grandis	HOM04D004522	ORTHO04D005489	8.8e-78	293.5	225	70.2
Mapoly0029s0092	Marchantia polymorpha	HOM04D004522	ORTHO04D005489	9.8e-77	290.0	280	53.6
SMO337G0103	Selaginella moellendorffii	HOM04D004522	ORTHO04D005489	8.6e-73	276.9	277	52.0
Bo4g044160	Brassica oleracea	HOM04D004522	ORTHO04D005489	6.1e-71	270.8	269	56.5
Pp3c10_15650	Physcomitrium patens	HOM04D004522	ORTHO04D005489	4.9e-68	261.2	276	49.3
Cre03.g154550	Chlamydomonas reinhardtii	HOM04D004522	ORTHO04D005489	2.6e-61	238.8	289	44.3
Bo4g084650	Brassica oleracea	HOM04D004522	ORTHO04D005489	7.8e-58	227.3	269	49.8
Manes.09G008100	Manihot esculenta	HOM04D004522	ORTHO04D005489	3.9e-57	224.9	133	83.5
MCO05G631	Micromonas commoda	HOM04D004522	ORTHO04D005489	2.0e-53	212.6	278	43.9
Eucgr.K01616	Eucalyptus grandis	HOM04D004522	ORTHO04D005489	5.2e-46	188.0	140	72.1
FVE23578	Fragaria vesca	HOM04D005580	ORTHO04D007055	7.5e-45	184.1	162	64.2
MCO04G012	Micromonas commoda	HOM04D004522	ORTHO04D005489	1.5e-40	169.9	160	57.5
MDO.mRNA.g.2441.5	Malus domestica	HOM04D004522	ORTHO04D005489	1.2e-37	160.2	133	60.2
Manes.09G008000	Manihot esculenta	HOM04D004522	ORTHO04D005489	1.9e-32	142.9	126	58.7
NNU_15380	Nelumbo nucifera	HOM04D004522	ORTHO04D005489	2.5e-32	142.5	264	39.4
RCO.g.29527.000002	Ricinus communis	HOM04D004522	ORTHO04D005489	3.6e-23	112.1	263	30.0
Medtr1046s0010	Medicago truncatula	HOM04D004522	ORTHO04D005489	6.2e-23	111.3	286	28.7
MDO.mRNA.g.2441.4	Malus domestica	HOM04D004522	ORTHO04D005489	1.1e-22	110.5	66	81.8
MDO.mRNA.g.181.26	Malus domestica	HOM04D004522	ORTHO04D005489	8.7e-17	90.9	55	76.4
Bo4g046080	Brassica oleracea	HOM04D004522	ORTHO04D005489	4.8e-15	85.1	52	80.8
C.cajan_48680.g	Cajanus cajan	HOM04D004522	ORTHO04D005489	1.4e-14	83.6	112	42.0
Gorai.011G171800	Gossypium raimondii	HOM04D002283	ORTHO04D005489	1.4e-14	83.6	68	60.3
MDO.mRNA.g.3690.4	Malus domestica	HOM04D004522	ORTHO04D005489	3.1e-14	82.4	52	73.1
Bo8g034280	Brassica oleracea	HOM04D004522	ORTHO04D005489	4.0e-14	82.0	50	78.0
Gorai.008G052500	Gossypium raimondii	HOM04D002283	ORTHO04D003443	2.6e-13	79.3	65	61.5
Bo6g074540	Brassica oleracea	HOM04D004522	ORTHO04D005489	5.5e-11	71.6	68	52.9
CAN.G102.1	Capsicum annuum	HOM04D000221	ORTHO04D000037	5.6e-08	61.6	54	53.7
MDO.mRNA.g.243.6	Malus domestica	HOM04D004522	ORTHO04D005489	6.2e-07	58.2	52	51.9

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment