Child GO terms

Original GO term
GO:0044260
Description
cellular macromolecule metabolic process
Type
BP

GO description genes species ath bdi cpa cre hvu mac olu osa osaindica ppa ptr sbi sit sly vvi zma
GO:0034645 cellular macromolecule biosynthetic process 48071 16 5331 2334 2733 1076 2898 3435 723 5554 3829 2478 3632 2845 2721 2904 2215 3363
GO:0044267 cellular protein metabolic process 47248 16 5013 2683 2284 1529 2458 3584 975 3417 3621 2620 4149 2816 2972 2987 2559 3581
GO:0016070 RNA metabolic process 34466 16 4194 1826 2332 693 1628 2792 630 2168 2455 1810 2954 1993 2187 2400 1773 2631
GO:0006464 cellular protein modification process 30389 16 2984 1804 1409 997 1689 2296 435 2356 2528 1403 2840 1913 2014 1890 1673 2158
GO:0032774 RNA biosynthetic process 26156 16 3025 1396 1852 341 1235 2247 296 1687 1912 1335 2356 1522 1750 1811 1319 2072
GO:0006351 transcription, DNA-templated 26109 16 3020 1393 1850 338 1233 2244 292 1685 1910 1332 2353 1521 1747 1805 1317 2069
GO:2000112 regulation of cellular macromolecule biosynthetic process 24514 16 2885 1297 1744 295 1157 2126 264 1624 1849 1206 2208 1413 1645 1648 1208 1945
GO:0051252 regulation of RNA metabolic process 23703 16 2719 1258 1721 278 1113 2089 240 1542 1773 1178 2163 1371 1589 1614 1175 1880
GO:2001141 regulation of RNA biosynthetic process 23577 16 2705 1252 1715 274 1103 2081 238 1533 1762 1170 2153 1364 1582 1609 1166 1870
GO:0006355 regulation of transcription, DNA-dependent 23551 16 2701 1252 1712 273 1102 2078 238 1533 1762 1168 2150 1364 1581 1603 1165 1869
GO:0006468 protein phosphorylation 21211 16 1292 1329 942 706 1237 1670 158 1775 1963 941 2170 1398 1505 1324 1227 1574
GO:0006259 DNA metabolic process 17980 16 919 643 512 747 1520 546 292 5018 2657 554 694 1276 676 838 477 611
GO:0006412 translation 10533 16 1393 534 523 287 439 819 294 663 651 828 804 548 598 698 556 898
GO:0006260 DNA replication 8032 16 363 238 161 380 1056 123 87 3009 1046 141 148 587 192 203 134 164
GO:0006396 RNA processing 6515 16 1076 336 355 259 297 410 273 366 405 353 450 351 331 485 341 427
GO:0006278 RNA-dependent DNA replication 5984 16 14 131 45 305 950 3 3 2900 926 14 8 474 82 93 16 20
GO:0015074 DNA integration 5307 16 10 90 18 65 106 5 4 3294 1263 41 24 142 43 173 18 11
GO:0006281 DNA repair 4286 16 337 212 225 164 229 245 151 308 354 245 351 386 313 323 183 260
GO:0044265 cellular macromolecule catabolic process 4066 16 699 222 210 122 212 269 89 272 278 211 271 249 221 261 210 270
GO:0034660 ncRNA metabolic process 3738 16 521 188 224 181 165 217 183 216 268 215 272 195 193 259 215 226
GO:0006457 protein folding 3472 16 352 178 202 150 175 254 180 199 222 219 291 186 194 204 170 296
GO:0044257 cellular protein catabolic process 3410 16 550 191 177 91 180 231 74 230 241 175 231 217 186 224 179 233
GO:0044264 cellular polysaccharide metabolic process 3388 16 676 162 177 58 161 235 45 202 197 193 298 179 183 199 212 211
GO:0051603 proteolysis involved in cellular protein catabolic process 3346 16 521 190 175 89 178 227 74 225 238 171 228 215 183 223 178 231
GO:0070647 protein modification by small protein conjugation or removal 3127 16 726 164 130 84 157 213 96 212 188 128 197 189 161 168 136 178
GO:0043632 modification-dependent macromolecule catabolic process 3104 16 436 183 167 85 170 213 71 217 227 151 215 203 172 212 170 212
GO:0019941 modification-dependent protein catabolic process 3104 16 436 183 167 85 170 213 71 217 227 151 215 203 172 212 170 212
GO:0006511 ubiquitin-dependent protein catabolic process 3072 16 430 181 166 83 169 211 71 216 225 149 213 200 171 211 169 207
GO:0006073 cellular glucan metabolic process 2774 16 473 140 153 54 143 204 33 180 168 165 194 157 160 175 187 188
GO:0032446 protein modification by small protein conjugation 2707 16 588 146 112 72 139 191 87 178 168 116 173 168 143 150 118 158
GO:0016567 protein ubiquitination 2554 16 565 139 104 66 131 181 80 167 160 106 163 159 135 140 111 147
GO:0016071 mRNA metabolic process 2457 16 480 121 127 85 113 168 85 135 130 153 170 120 126 161 127 156
GO:0006399 tRNA metabolic process 2433 16 170 129 149 111 117 158 135 145 200 153 189 139 129 191 156 162
GO:0034470 ncRNA processing 2421 16 426 118 133 113 98 133 128 135 160 126 177 107 114 187 127 139
GO:0033692 cellular polysaccharide biosynthetic process 2418 16 532 106 132 46 108 153 37 123 139 135 227 118 122 137 153 150
GO:0043414 macromolecule methylation 2186 16 578 104 109 74 97 111 63 108 120 105 147 116 102 124 113 115
GO:2000113 negative regulation of cellular macromolecule biosynthetic process 2044 16 430 107 101 42 112 109 34 135 143 105 131 105 117 124 112 137
GO:0006397 mRNA processing 1953 16 268 106 106 72 98 143 70 115 110 131 146 102 108 135 107 136
GO:0071103 DNA conformation change 1871 16 124 103 98 163 113 131 49 101 117 107 136 137 96 153 96 147
GO:0009250 glucan biosynthetic process 1802 16 327 84 108 42 90 122 25 101 110 107 123 96 99 113 128 127
GO:0006310 DNA recombination 1714 16 283 68 83 88 82 72 55 221 156 71 151 97 67 76 65 79
GO:0009451 RNA modification 1670 16 449 73 90 71 66 86 78 82 118 73 109 69 71 74 73 88
GO:0016570 histone modification 1665 16 402 83 89 49 75 88 37 94 93 77 109 91 89 101 85 103
GO:0006470 protein dephosphorylation 1659 16 238 92 69 58 81 142 35 113 118 75 124 89 98 116 89 122
GO:0051253 negative regulation of RNA metabolic process 1655 16 409 88 84 36 83 93 28 81 87 85 109 82 82 107 96 105
GO:0045892 negative regulation of transcription, DNA-dependent 1654 16 409 88 84 35 83 93 28 81 87 85 109 82 82 107 96 105
GO:0032268 regulation of cellular protein metabolic process 1529 16 384 70 55 40 76 70 35 140 121 68 90 66 87 66 66 95
GO:0044036 cell wall macromolecule metabolic process 1492 16 333 67 76 38 70 94 10 80 100 83 120 85 76 100 73 87
GO:0006323 DNA packaging 1456 16 93 81 67 146 92 107 29 79 85 80 109 102 73 124 73 116
GO:0008380 RNA splicing 1442 16 342 69 68 42 64 91 29 80 77 68 97 103 68 76 65 103
GO:0051254 positive regulation of RNA metabolic process 1418 16 475 64 72 29 53 71 22 65 70 73 89 60 64 75 66 70
GO:0045893 positive regulation of transcription, DNA-dependent 1394 16 473 63 70 28 52 70 21 64 69 71 86 59 63 74 65 66
GO:0031497 chromatin assembly 1360 16 82 77 63 140 88 101 25 75 80 75 102 92 69 119 61 111
GO:0006334 nucleosome assembly 1332 16 72 76 62 139 87 100 24 74 79 73 100 91 68 117 60 110
GO:0006414 translational elongation 1317 16 739 37 36 17 28 53 12 40 50 61 50 26 42 42 35 49
GO:0008033 tRNA processing 1278 16 79 67 66 62 57 83 83 78 102 75 110 62 63 130 77 84
GO:0016072 rRNA metabolic process 1241 16 356 56 67 65 42 55 46 67 66 58 76 50 54 61 55 67
GO:0009100 glycoprotein metabolic process 1234 16 264 66 60 20 60 90 15 82 79 48 98 70 71 60 61 90
GO:0006486 protein glycosylation 1230 16 260 66 60 20 60 90 15 82 79 48 98 70 71 60 61 90
GO:0009101 glycoprotein biosynthetic process 1230 16 260 66 60 20 60 90 15 82 79 48 98 70 71 60 61 90
GO:0051273 beta-glucan metabolic process 1222 16 189 56 84 17 64 86 6 89 72 66 90 68 68 77 103 87
GO:0006364 rRNA processing 1158 16 349 52 64 50 39 51 46 59 60 55 70 45 49 56 51 62
GO:0006479 protein methylation 1157 16 320 56 50 33 55 57 22 52 61 56 88 70 57 66 50 64
GO:0008213 protein alkylation 1157 16 320 56 50 33 55 57 22 52 61 56 88 70 57 66 50 64
GO:0043039 tRNA aminoacylation 1139 16 63 62 83 49 60 76 54 67 101 78 79 76 66 61 86 78
GO:0006418 tRNA aminoacylation for protein translation 1137 16 63 62 83 49 60 76 54 67 101 77 79 76 66 61 85 78
GO:0051274 beta-glucan biosynthetic process 1098 16 119 54 82 17 62 83 6 65 70 65 85 66 66 73 101 84
GO:0030243 cellulose metabolic process 960 16 175 44 45 8 41 64 4 73 54 50 77 54 53 65 90 63
GO:0000723 telomere maintenance 949 16 70 22 8 19 47 8 11 104 146 13 51 196 107 105 13 29
GO:0016571 histone methylation 911 16 311 42 37 15 42 39 10 43 46 37 55 55 44 52 35 48
GO:0006261 DNA-dependent DNA replication 891 16 258 44 49 31 47 40 35 41 42 42 51 37 39 41 47 47
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 859 16 148 48 43 26 43 65 18 48 51 47 67 52 50 54 43 56
GO:0000375 RNA splicing, via transesterification reactions 859 16 148 48 43 26 43 65 18 48 51 47 67 52 50 54 43 56
GO:0031399 regulation of protein modification process 855 16 246 44 34 28 36 40 19 64 50 39 53 36 42 39 38 47
GO:0030244 cellulose biosynthetic process 836 16 105 42 43 8 39 61 4 49 52 49 72 52 51 61 88 60
GO:0006352 DNA-dependent transcription, initiation 823 16 55 55 50 18 43 64 23 52 60 44 79 51 53 51 48 77
GO:0046777 protein autophosphorylation 823 16 154 52 45 17 56 49 13 45 58 36 47 59 41 53 42 56
GO:0006366 transcription from RNA polymerase II promoter 796 16 85 35 56 24 42 53 26 49 50 65 61 50 50 54 38 58
GO:0005982 starch metabolic process 795 16 247 36 32 27 33 35 21 47 42 41 42 34 40 37 36 45
GO:0000398 mRNA splicing, via spliceosome 786 16 137 41 40 25 35 60 18 42 50 43 63 48 45 51 38 50
GO:0006304 DNA modification 775 16 197 35 38 27 35 37 36 38 41 37 41 39 37 49 49 39
GO:0044728 DNA methylation or demethylation 767 16 196 35 38 27 35 37 31 38 40 37 41 39 37 48 49 39
GO:0034968 histone lysine methylation 754 16 261 36 31 9 34 31 5 33 38 29 47 47 36 46 29 42
GO:0006306 DNA methylation 743 16 194 34 36 26 34 36 31 36 38 36 40 37 35 45 48 37
GO:0006305 DNA alkylation 743 16 194 34 36 26 34 36 31 36 38 36 40 37 35 45 48 37
GO:0016998 cell wall macromolecule catabolic process 732 16 36 35 36 30 39 57 6 51 57 53 77 52 46 62 40 55
GO:0018193 peptidyl-amino acid modification 725 16 118 32 46 29 31 44 29 46 54 42 52 38 39 45 40 40
GO:0051052 regulation of DNA metabolic process 707 16 211 33 29 22 30 36 19 35 32 29 40 38 32 41 34 46
GO:0006302 double-strand break repair 693 16 115 38 43 28 39 42 26 43 38 40 43 43 37 36 39 43
GO:0006413 translational initiation 659 16 71 33 34 24 37 52 32 34 36 57 66 31 37 40 31 44
GO:0006417 regulation of translation 657 16 142 24 19 12 39 29 15 74 69 28 35 28 44 26 26 47
GO:0010383 cell wall polysaccharide metabolic process 631 16 238 30 28 3 28 33 3 27 30 23 41 29 28 32 29 29
GO:0006401 RNA catabolic process 547 16 134 22 27 31 23 31 15 35 28 31 33 25 27 31 25 29
GO:0006342 chromatin silencing 536 16 246 19 22 7 19 19 8 18 19 23 25 23 19 21 24 24
GO:0010498 proteasomal protein catabolic process 508 16 221 19 21 8 18 25 9 21 26 20 25 18 17 20 20 20
GO:0001510 RNA methylation 503 16 196 19 27 16 14 24 13 25 29 19 27 16 15 20 21 22
GO:0010410 hemicellulose metabolic process 497 16 201 23 22 3 23 24 2 21 23 17 29 23 22 22 19 23
GO:0001932 regulation of protein phosphorylation 495 16 94 29 20 16 24 25 12 51 36 26 33 27 26 21 26 29
GO:0070646 protein modification by small protein removal 473 16 191 18 18 12 18 22 9 34 20 12 24 21 18 18 18 20
GO:0006400 tRNA modification 466 16 29 25 28 26 24 34 33 30 48 25 39 23 24 25 26 27
GO:0019252 starch biosynthetic process 460 16 202 16 15 13 14 14 11 25 22 18 19 16 17 18 15 25
GO:0000724 double-strand break repair via homologous recombination 459 16 71 25 33 20 26 29 19 29 24 22 26 31 25 24 25 30
GO:0000725 recombinational repair 459 16 71 25 33 20 26 29 19 29 24 22 26 31 25 24 25 30
GO:0032269 negative regulation of cellular protein metabolic process 458 16 67 19 21 6 30 17 5 58 61 19 26 25 34 17 19 34
GO:0070589 cellular component macromolecule biosynthetic process 455 16 197 17 26 7 14 19 3 15 25 20 23 17 15 20 20 17
GO:0044038 cell wall macromolecule biosynthetic process 455 16 197 17 26 7 14 19 3 15 25 20 23 17 15 20 20 17
GO:0006357 regulation of transcription from RNA polymerase II promoter 439 16 29 20 37 13 27 29 13 26 28 41 33 27 23 38 23 32
GO:0045859 regulation of protein kinase activity 439 16 91 27 17 10 21 23 6 48 33 19 30 24 23 18 23 26
GO:0006275 regulation of DNA replication 433 16 145 21 16 10 18 20 10 20 17 17 23 23 20 23 22 28
GO:0043543 protein acylation 431 16 160 16 21 12 12 22 12 22 19 20 19 15 17 20 22 22
GO:0001522 pseudouridine synthesis 431 16 26 25 27 26 24 26 29 26 35 27 32 23 26 23 22 34
GO:0042158 lipoprotein biosynthetic process 417 16 138 15 20 9 21 21 11 17 25 21 30 15 19 18 16 21
GO:0006497 protein lipidation 412 16 138 15 20 9 21 21 11 17 20 21 30 15 19 18 16 21
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process 410 16 137 18 20 8 17 24 9 20 24 19 24 17 16 19 19 19
GO:0031050 dsRNA fragmentation 407 16 145 20 16 12 18 18 8 16 17 15 22 18 21 21 22 18
GO:0070918 production of small RNA involved in gene silencing by RNA 407 16 145 20 16 12 18 18 8 16 17 15 22 18 21 21 22 18
GO:0070592 cell wall polysaccharide biosynthetic process 406 16 196 16 15 2 13 17 2 14 16 14 22 15 14 16 18 16
GO:0006289 nucleotide-excision repair 403 16 26 23 20 17 19 38 25 26 23 32 33 22 34 20 20 25
GO:0031123 RNA 3'-end processing 401 16 32 26 22 21 24 22 15 32 30 20 28 25 26 27 24 27
GO:0044786 cell cycle DNA replication 401 16 122 21 21 12 19 21 12 18 16 20 24 16 18 20 23 18
GO:0006284 base-excision repair 400 16 29 24 22 9 22 27 9 27 27 42 38 22 26 30 22 24
GO:0042023 DNA endoreduplication 400 16 122 21 21 12 19 21 12 17 16 20 24 16 18 20 23 18
GO:0071900 regulation of protein serine/threonine kinase activity 399 16 80 24 17 9 19 22 6 42 30 18 30 21 20 17 22 22
GO:0018205 peptidyl-lysine modification 395 16 37 20 21 16 17 29 17 31 32 24 27 23 25 28 25 23
GO:0006402 mRNA catabolic process 393 16 120 14 20 14 16 23 13 21 17 24 22 15 16 22 17 19
GO:0045491 xylan metabolic process 361 16 186 13 15 2 13 14 1 12 13 10 18 13 12 13 12 14
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity 356 16 63 22 15 7 18 19 4 41 27 16 28 20 19 15 21 21
GO:0000956 nuclear-transcribed mRNA catabolic process 353 16 118 12 16 13 14 18 11 19 14 21 19 13 14 19 15 17
GO:0035825 reciprocal DNA recombination 349 16 146 14 13 8 16 14 8 15 15 13 15 17 14 11 13 17
GO:0030422 production of siRNA involved in RNA interference 343 16 140 16 12 8 12 16 6 14 13 11 17 14 17 16 16 15
GO:0006487 protein N-linked glycosylation 333 16 108 12 20 8 12 23 5 15 15 12 33 11 12 16 13 18
GO:0007131 reciprocal meiotic recombination 333 16 145 13 12 7 15 13 8 14 14 12 13 16 13 10 12 16
GO:0006298 mismatch repair 310 16 16 13 22 12 19 28 12 15 18 19 24 19 14 39 18 22
GO:0045492 xylan biosynthetic process 303 15 183 9 10 1 8 10 0 8 9 8 13 9 8 8 9 10
GO:0051567 histone H3-K9 methylation 298 16 183 8 8 1 8 9 2 8 10 7 8 10 7 10 9 10
GO:0006270 DNA replication initiation 295 16 66 15 13 13 22 13 12 15 18 13 17 16 13 13 17 19
GO:0017148 negative regulation of translation 286 16 14 12 10 3 23 10 2 46 50 14 15 17 27 9 10 24
GO:0010413 glucuronoxylan metabolic process 284 15 182 8 8 1 6 8 0 7 7 7 12 7 7 7 8 9
GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation 278 16 143 8 8 10 7 9 6 9 11 8 13 7 7 8 7 17
GO:0006476 protein deacetylation 278 16 18 14 26 18 13 19 12 21 21 22 19 14 18 13 14 16
GO:0035601 protein deacylation 278 16 18 14 26 18 13 19 12 21 21 22 19 14 18 13 14 16
GO:0006415 translational termination 268 16 16 16 15 6 14 26 8 18 23 15 18 14 17 21 14 27
GO:0016575 histone deacetylation 266 16 18 14 24 18 13 19 12 21 21 16 17 14 16 13 14 16
GO:0006075 (1->3)-beta-D-glucan biosynthetic process 262 16 14 12 39 9 23 22 2 16 18 16 13 14 15 12 13 24
GO:0006074 (1->3)-beta-D-glucan metabolic process 262 16 14 12 39 9 23 22 2 16 18 16 13 14 15 12 13 24
GO:0044247 cellular polysaccharide catabolic process 256 16 43 14 13 11 12 9 9 37 14 12 14 13 15 12 13 15
GO:0006473 protein acetylation 255 16 38 13 15 11 9 14 11 19 16 17 15 12 14 16 18 17
GO:0035196 production of miRNAs involved in gene silencing by miRNA 251 16 133 10 7 6 8 6 3 8 9 7 10 8 8 10 9 9
GO:0032270 positive regulation of cellular protein metabolic process 250 16 37 14 9 5 13 20 8 15 17 10 20 12 21 17 14 18
GO:0006265 DNA topological change 243 16 17 13 20 8 11 13 10 12 22 15 14 25 14 18 12 19
GO:0006506 GPI anchor biosynthetic process 235 16 15 12 14 8 18 13 10 14 17 18 26 12 16 14 12 16
GO:0006367 transcription initiation from RNA polymerase II promoter 235 16 15 11 14 7 9 19 9 18 17 18 23 17 19 10 11 18
GO:0006354 DNA-dependent transcription, elongation 231 16 132 6 7 6 5 6 8 5 7 8 8 5 5 7 7 9
GO:0000338 protein deneddylation 222 16 102 8 8 8 7 8 5 7 8 8 9 7 9 8 8 12
GO:0031365 N-terminal protein amino acid modification 221 16 124 5 10 4 5 11 5 5 6 7 7 5 6 7 7 7
GO:0006475 internal protein amino acid acetylation 219 16 24 12 13 10 8 13 10 17 14 16 14 11 13 14 16 14
GO:0018394 peptidyl-lysine acetylation 219 16 24 12 13 10 8 13 10 17 14 16 14 11 13 14 16 14
GO:0018393 internal peptidyl-lysine acetylation 219 16 24 12 13 10 8 13 10 17 14 16 14 11 13 14 16 14
GO:0016573 histone acetylation 216 16 24 12 13 9 8 13 10 17 14 14 14 11 13 14 16 14
GO:0000154 rRNA modification 216 16 77 8 22 6 4 9 6 8 14 7 17 6 8 8 11 5
GO:0010267 production of ta-siRNAs involved in RNA interference 213 16 111 8 6 4 6 7 1 8 7 5 9 7 8 9 8 9
GO:0043631 RNA polyadenylation 210 16 12 15 13 6 13 13 4 21 21 6 13 14 15 14 12 18
GO:0031048 chromatin silencing by small RNA 208 16 118 5 7 3 7 5 1 4 8 6 6 10 4 6 9 9
GO:0016579 protein deubiquitination 205 16 61 9 9 3 10 12 2 25 10 3 12 15 8 7 9 10
GO:0005983 starch catabolic process 197 16 18 13 12 11 11 9 9 13 13 12 13 12 14 11 13 13
GO:0006313 transposition, DNA-mediated 195 15 1 4 1 1 15 1 0 36 79 5 13 26 5 2 1 5
GO:0010388 cullin deneddylation 190 16 101 6 6 6 6 5 5 6 6 6 6 5 6 7 6 7
GO:0043687 post-translational protein modification 189 16 98 2 41 5 2 3 2 3 3 3 5 2 3 6 6 5
GO:0090329 regulation of DNA-dependent DNA replication 189 16 30 12 10 7 11 10 6 11 10 10 12 11 12 12 11 14
GO:0032392 DNA geometric change 184 16 17 9 16 9 10 11 14 10 10 12 13 10 9 11 11 12
GO:0006346 methylation-dependent chromatin silencing 183 16 121 4 4 1 4 4 3 4 5 5 5 4 5 5 4 5
GO:0018298 protein-chromophore linkage 175 15 30 7 8 4 9 7 0 28 3 8 10 9 4 28 8 12
GO:0035304 regulation of protein dephosphorylation 172 15 136 2 2 5 2 1 2 2 3 4 2 0 2 4 1 4
GO:0031400 negative regulation of protein modification process 172 16 53 7 11 3 7 7 3 12 11 5 11 8 7 8 9 10
GO:0051053 negative regulation of DNA metabolic process 169 16 16 11 11 7 10 11 7 12 10 9 11 11 11 11 9 12
GO:0032508 DNA duplex unwinding 168 16 16 8 15 8 9 10 13 9 9 11 12 9 8 10 10 11
GO:0018342 protein prenylation 162 16 11 11 11 5 8 11 7 10 10 11 12 9 13 9 10 14
GO:0006498 N-terminal protein lipidation 160 16 120 2 5 1 2 6 1 2 2 2 3 2 2 3 3 4
GO:0006499 N-terminal protein myristoylation 160 16 120 2 5 1 2 6 1 2 2 2 3 2 2 3 3 4
GO:0018377 protein myristoylation 160 16 120 2 5 1 2 6 1 2 2 2 3 2 2 3 3 4
GO:0016556 mRNA modification 160 16 115 2 3 2 2 3 1 2 4 2 5 4 3 6 4 2
GO:0032875 regulation of DNA endoreduplication 158 16 25 10 8 6 10 9 4 9 8 9 10 9 10 10 10 11
GO:0031124 mRNA 3'-end processing 154 16 14 9 11 8 11 10 4 10 10 8 12 9 10 10 9 9
GO:0042026 protein refolding 154 16 9 9 7 4 12 13 4 8 13 10 15 9 9 11 7 14
GO:0034661 ncRNA catabolic process 153 16 13 8 7 18 7 8 3 13 10 7 11 10 11 9 8 10
GO:0010411 xyloglucan metabolic process 153 16 17 11 8 2 11 11 2 10 11 8 12 11 11 10 8 10
GO:0006465 signal peptide processing 150 16 11 9 7 4 9 14 7 9 11 12 13 9 10 7 7 11
GO:0031056 regulation of histone modification 141 16 12 9 9 5 9 12 4 9 10 7 11 8 8 11 9 8
GO:0045226 extracellular polysaccharide biosynthetic process 136 16 10 5 7 3 4 10 4 7 6 11 42 5 7 5 4 6
GO:0046379 extracellular polysaccharide metabolic process 136 16 10 5 7 3 4 10 4 7 6 11 42 5 7 5 4 6
GO:0016926 protein desumoylation 133 16 81 3 3 3 3 4 2 4 4 3 5 3 3 5 3 4
GO:0043545 molybdopterin cofactor metabolic process 132 16 9 8 7 9 5 8 7 8 10 9 9 5 8 8 8 14
GO:0051189 prosthetic group metabolic process 132 16 9 8 7 9 5 8 7 8 10 9 9 5 8 8 8 14
GO:0019720 Mo-molybdopterin cofactor metabolic process 130 16 9 8 6 9 5 8 7 8 10 9 9 5 8 8 8 13
GO:0045727 positive regulation of translation 128 16 23 5 4 3 5 12 5 8 9 6 10 4 10 10 7 7
GO:0032324 molybdopterin cofactor biosynthetic process 127 16 9 8 7 8 5 7 7 8 10 8 9 5 7 8 8 13
GO:0006301 postreplication repair 126 16 36 6 6 6 5 7 4 6 4 6 7 6 6 7 7 7
GO:0031087 deadenylation-independent decapping of nuclear-transcribed mRNA 126 16 8 6 8 4 6 9 5 9 8 11 10 7 8 9 8 10
GO:0031086 nuclear-transcribed mRNA catabolic process, deadenylation-independent decay 126 16 8 6 8 4 6 9 5 9 8 11 10 7 8 9 8 10
GO:0006777 Mo-molybdopterin cofactor biosynthetic process 125 16 9 8 6 8 5 7 7 8 10 8 9 5 7 8 8 12
GO:0036260 RNA capping 124 16 10 9 4 6 5 8 4 11 9 14 9 6 5 9 7 8
GO:0009452 7-methylguanosine RNA capping 124 16 10 9 4 6 5 8 4 11 9 14 9 6 5 9 7 8
GO:0001933 negative regulation of protein phosphorylation 123 16 47 5 6 2 5 4 2 9 8 2 6 6 5 4 5 7
GO:0008612 peptidyl-lysine modification to hypusine 122 16 8 5 6 4 6 12 5 10 12 6 8 8 9 11 6 6
GO:0016925 protein sumoylation 121 16 20 6 7 5 6 7 5 9 7 7 8 6 7 8 6 7
GO:0042793 transcription from plastid promoter 121 15 72 4 3 3 4 3 0 4 5 2 3 3 4 4 4 3
GO:0051090 regulation of sequence-specific DNA binding transcription factor activity 119 16 7 6 5 3 5 9 3 8 9 7 12 8 7 11 11 8
GO:0006471 protein ADP-ribosylation 117 16 7 6 8 2 8 5 2 8 8 7 14 9 12 7 5 9
GO:0006448 regulation of translational elongation 116 16 7 5 7 3 6 12 3 9 10 7 8 4 11 10 6 8
GO:0008156 negative regulation of DNA replication 116 16 9 8 8 4 7 7 4 8 6 7 8 7 9 9 7 8
GO:0006308 DNA catabolic process 116 14 9 10 7 0 10 8 0 8 10 6 8 8 9 7 7 9
GO:0005977 glycogen metabolic process 116 16 8 5 7 5 4 9 3 8 7 14 13 6 6 6 6 9
GO:0006378 mRNA polyadenylation 114 16 8 8 8 5 8 8 2 7 9 4 8 7 9 8 7 8
GO:0031401 positive regulation of protein modification process 113 16 13 8 4 2 8 8 2 6 7 4 9 7 11 7 6 11
GO:0010417 glucuronoxylan biosynthetic process 112 15 12 8 8 1 6 8 0 7 5 7 12 7 7 7 8 9
GO:0005978 glycogen biosynthetic process 112 16 8 5 6 4 4 8 3 8 7 13 13 6 6 6 6 9
GO:0051054 positive regulation of DNA metabolic process 112 16 10 7 5 5 7 9 3 7 6 5 9 9 6 6 7 11
GO:0043628 ncRNA 3'-end processing 110 16 11 7 5 9 5 5 7 5 5 7 8 6 7 10 7 6
GO:0006469 negative regulation of protein kinase activity 108 16 46 5 5 1 4 3 1 8 7 1 5 5 4 3 4 6
GO:0006268 DNA unwinding involved in DNA replication 108 16 9 6 11 6 6 6 10 6 6 6 6 6 6 6 6 6
GO:0032544 plastid translation 106 16 10 7 6 4 6 9 3 6 5 7 7 8 7 8 6 7
GO:0051568 histone H3-K4 methylation 106 16 10 6 6 4 7 8 3 7 8 6 9 6 6 6 7 7
GO:0031060 regulation of histone methylation 104 16 9 7 6 2 8 9 3 7 7 4 8 8 6 8 6 6
GO:0052325 cell wall pectin biosynthetic process 103 16 13 7 5 1 5 7 2 6 7 6 9 6 6 8 9 6
GO:0016572 histone phosphorylation 102 16 63 2 1 2 2 4 3 2 4 2 2 2 2 2 4 5
GO:0000387 spliceosomal snRNP assembly 101 16 7 6 7 3 5 6 3 6 7 10 10 7 6 8 4 6
GO:2000104 negative regulation of DNA-dependent DNA replication 101 16 8 7 7 3 6 6 3 7 5 7 7 6 8 8 6 7
GO:0010206 photosystem II repair 99 16 10 7 6 4 4 5 4 7 8 6 7 6 7 6 6 6
GO:0051865 protein autoubiquitination 99 16 13 6 7 4 5 8 1 6 7 8 6 7 5 5 3 8
GO:0030091 protein repair 99 16 10 7 6 4 4 5 4 7 8 6 7 6 7 6 6 6
GO:0000245 spliceosomal complex assembly 97 16 8 6 8 2 4 6 3 6 6 6 12 7 10 2 3 8
GO:0010216 maintenance of DNA methylation 96 16 8 6 5 5 7 5 1 5 4 8 7 7 6 8 8 6
GO:0030261 chromosome condensation 94 16 10 4 4 6 4 6 4 4 5 5 7 10 4 5 12 4
GO:0090501 RNA phosphodiester bond hydrolysis 94 16 20 5 4 7 3 4 5 4 5 7 5 5 4 7 4 5
GO:0006282 regulation of DNA repair 92 16 7 6 5 6 5 8 3 5 6 5 7 7 6 5 4 7
GO:0006312 mitotic recombination 92 16 57 3 2 2 2 2 2 3 4 3 2 2 2 2 2 2
GO:0018208 peptidyl-proline modification 91 16 43 3 2 1 4 2 2 3 5 3 3 4 3 5 4 4
GO:0008653 lipopolysaccharide metabolic process 91 15 5 2 2 0 1 5 7 1 10 3 42 2 2 4 4 1
GO:0009103 lipopolysaccharide biosynthetic process 91 15 5 2 2 0 1 5 7 1 10 3 42 2 2 4 4 1
GO:0032784 regulation of DNA-dependent transcription, elongation 89 16 9 5 6 5 4 5 5 4 6 7 7 4 4 5 6 7
GO:0071901 negative regulation of protein serine/threonine kinase activity 87 16 42 3 5 1 3 3 1 3 5 1 5 3 2 3 4 3
GO:0006353 DNA-dependent transcription, termination 87 16 7 5 6 2 5 5 1 5 6 5 9 4 9 8 6 4
GO:0007076 mitotic chromosome condensation 87 16 5 4 4 5 4 6 4 4 4 5 7 10 4 5 12 4
GO:0006370 7-methylguanosine mRNA capping 86 16 7 5 3 4 4 5 3 8 5 13 5 4 3 7 5 5
GO:0016444 somatic cell DNA recombination 86 16 35 3 3 3 3 5 3 4 3 3 3 2 3 5 4 4
GO:0031167 rRNA methylation 86 16 11 3 17 4 2 5 4 4 5 4 7 2 3 5 8 2
GO:0018344 protein geranylgeranylation 85 16 5 6 4 3 4 4 3 5 5 6 8 4 9 5 5 9
GO:0006434 seryl-tRNA aminoacylation 85 16 2 6 4 8 5 5 2 5 8 9 5 7 7 4 4 4
GO:0044030 regulation of DNA methylation 84 16 8 3 5 3 4 4 3 5 5 5 7 4 4 11 6 7
GO:0010586 miRNA metabolic process 83 16 7 5 5 4 4 5 3 6 4 5 6 6 7 5 5 6
GO:0016075 rRNA catabolic process 83 15 7 4 3 15 3 4 0 8 6 3 6 5 5 5 4 5
GO:0032204 regulation of telomere maintenance 82 16 54 2 1 1 2 2 2 3 2 1 2 2 2 2 2 2
GO:0002097 tRNA wobble base modification 82 16 5 5 7 3 5 5 6 5 9 3 7 5 4 4 4 5
GO:0045003 double-strand break repair via synthesis-dependent strand annealing 82 16 6 5 5 5 4 5 6 7 5 5 5 4 6 4 5 5
GO:0030433 ER-associated ubiquitin-dependent protein catabolic process 80 16 8 5 5 4 4 5 4 4 5 7 5 4 5 6 5 4
GO:0006432 phenylalanyl-tRNA aminoacylation 79 16 3 3 5 4 6 7 6 3 6 4 5 3 3 6 10 5
GO:0030488 tRNA methylation 79 16 5 4 5 3 3 6 3 7 8 5 9 3 4 5 5 4
GO:0042780 tRNA 3'-end processing 78 16 5 5 4 7 4 4 5 4 4 5 5 4 4 8 5 5
GO:2000904 regulation of starch metabolic process 77 16 8 4 3 3 4 7 3 7 4 4 7 4 6 4 4 5
GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation 77 16 7 4 4 5 3 6 3 5 6 4 7 3 3 4 4 9
GO:0006449 regulation of translational termination 76 16 4 3 4 1 4 9 3 7 8 3 5 2 7 8 4 4
GO:0006452 translational frameshifting 76 16 4 3 4 1 4 9 3 7 8 3 5 2 7 8 4 4
GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity 76 16 4 4 3 2 3 6 2 6 7 3 8 4 5 8 5 6
GO:0045905 positive regulation of translational termination 76 16 4 3 4 1 4 9 3 7 8 3 5 2 7 8 4 4
GO:0045901 positive regulation of translational elongation 76 16 4 3 4 1 4 9 3 7 8 3 5 2 7 8 4 4
GO:0031935 regulation of chromatin silencing 76 16 9 4 5 2 5 3 2 4 5 5 6 6 4 6 6 4
GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 76 16 12 4 4 4 4 6 2 7 4 5 4 3 4 4 4 5
GO:0032876 negative regulation of DNA endoreduplication 75 16 6 5 5 2 5 5 1 5 4 6 5 4 6 6 5 5
GO:0006419 alanyl-tRNA aminoacylation 74 16 4 3 8 3 6 3 3 4 7 4 5 7 4 2 8 3
GO:0031425 chloroplast RNA processing 73 16 13 5 4 1 4 5 3 5 4 4 6 4 3 4 4 4
GO:0002098 tRNA wobble uridine modification 71 16 4 4 7 3 4 4 6 4 8 3 6 4 3 4 3 4
GO:0010587 miRNA catabolic process 70 16 6 4 4 3 4 4 3 5 4 4 5 5 6 4 4 5
GO:0018022 peptidyl-lysine methylation 68 16 6 4 3 2 4 5 2 5 7 3 6 5 4 4 4 4
GO:0006513 protein monoubiquitination 68 16 5 5 4 4 4 5 3 4 5 4 4 4 4 4 5 4
GO:0010962 regulation of glucan biosynthetic process 68 16 8 4 3 3 4 4 3 4 4 4 6 4 6 3 4 4
GO:0051570 regulation of histone H3-K9 methylation 68 16 5 5 5 1 4 5 2 5 5 3 5 5 4 5 5 4
GO:0000469 cleavage involved in rRNA processing 67 16 18 3 3 3 2 3 2 3 4 4 3 4 3 5 3 4
GO:0043967 histone H4 acetylation 67 16 6 4 4 2 2 4 4 4 5 6 4 4 5 4 5 4
GO:0006266 DNA ligation 67 16 5 4 4 4 4 6 2 4 5 3 4 4 4 5 4 5
GO:0018202 peptidyl-histidine modification 66 16 6 3 14 3 3 3 3 3 4 3 4 4 2 5 3 3
GO:0080188 RNA-directed DNA methylation 66 16 10 3 5 2 5 3 2 5 2 5 4 3 3 4 6 4
GO:0032776 DNA methylation on cytosine 66 15 14 3 5 2 4 3 0 2 4 5 5 3 3 4 5 4
GO:0045292 mRNA cis splicing, via spliceosome 66 16 12 3 4 3 2 6 4 3 2 3 6 5 3 2 3 5
GO:0050684 regulation of mRNA processing 66 16 7 2 4 3 7 3 1 4 4 4 5 4 4 3 5 6
GO:0000373 Group II intron splicing 65 14 11 6 2 1 7 5 0 6 0 3 4 3 5 3 4 5
GO:0000712 resolution of meiotic recombination intermediates 65 16 6 4 4 2 6 4 2 4 4 5 4 5 4 3 3 5
GO:0006430 lysyl-tRNA aminoacylation 65 16 3 3 2 2 2 4 3 2 5 8 4 3 2 10 6 6
GO:0010304 PSII associated light-harvesting complex II catabolic process 64 15 29 1 2 2 2 4 0 5 3 4 3 2 3 1 1 2
GO:0006438 valyl-tRNA aminoacylation 64 16 3 3 2 2 3 7 2 5 10 3 5 2 5 3 5 4
GO:0006491 N-glycan processing 64 16 8 3 4 2 3 6 1 4 3 4 8 3 4 3 3 5
GO:0006379 mRNA cleavage 64 16 9 5 3 4 3 3 3 4 5 3 4 3 5 3 3 4
GO:0006376 mRNA splice site selection 63 16 5 4 3 1 3 6 1 4 5 5 5 5 6 2 2 6
GO:0031058 positive regulation of histone modification 63 15 6 4 3 0 6 6 1 4 4 2 5 5 4 5 4 4
GO:0031062 positive regulation of histone methylation 63 15 6 4 3 0 6 6 1 4 4 2 5 5 4 5 4 4
GO:0009969 xyloglucan biosynthetic process 63 16 6 5 3 1 5 5 1 5 5 3 5 5 5 3 1 5
GO:0006446 regulation of translational initiation 62 16 24 1 2 2 4 2 5 2 1 3 4 2 1 2 2 5
GO:0006426 glycyl-tRNA aminoacylation 62 16 4 3 8 2 4 6 2 3 6 2 5 3 3 3 3 5
GO:0045740 positive regulation of DNA replication 62 16 6 4 2 2 4 5 2 4 3 3 5 5 3 3 5 6
GO:0006290 pyrimidine dimer repair 61 16 5 5 4 4 3 4 4 5 3 3 4 3 3 4 3 4
GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process 61 15 6 4 4 1 5 4 0 4 5 3 5 5 3 4 4 4
GO:0000726 non-recombinational repair 58 16 3 3 2 3 2 4 3 3 4 4 6 4 4 5 4 4
GO:0006421 asparaginyl-tRNA aminoacylation 58 16 6 2 3 1 2 5 3 3 3 4 5 3 3 3 8 4
GO:0006482 protein demethylation 58 16 5 3 4 4 4 4 1 2 3 4 6 3 3 3 5 4
GO:0006383 transcription from RNA polymerase III promoter 58 16 3 6 4 2 4 5 2 4 3 3 5 4 4 3 3 3
GO:0030245 cellulose catabolic process 58 10 25 1 0 0 1 0 0 24 1 0 1 1 1 1 0 2
GO:0008214 protein dealkylation 58 16 5 3 4 4 4 4 1 2 3 4 6 3 3 3 5 4
GO:0006303 double-strand break repair via nonhomologous end joining 58 16 3 3 2 3 2 4 3 3 4 4 6 4 4 5 4 4
GO:0016577 histone demethylation 58 16 5 3 4 4 4 4 1 2 3 4 6 3 3 3 5 4
GO:0070076 histone lysine demethylation 58 16 5 3 4 4 4 4 1 2 3 4 6 3 3 3 5 4
GO:0051275 beta-glucan catabolic process 58 10 25 1 0 0 1 0 0 24 1 0 1 1 1 1 0 2
GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity 57 13 27 2 4 0 2 2 0 2 4 0 4 2 1 2 3 2
GO:0006429 leucyl-tRNA aminoacylation 56 16 2 3 2 2 5 2 2 4 4 2 4 8 3 5 3 5
GO:0006515 misfolded or incompletely synthesized protein catabolic process 56 16 5 2 3 1 2 5 2 3 4 5 4 4 4 5 2 5
GO:0070734 histone H3-K27 methylation 56 14 5 2 5 0 3 5 0 3 2 1 7 4 4 6 5 4
GO:0006428 isoleucyl-tRNA aminoacylation 55 16 3 2 4 3 2 2 3 4 5 3 6 7 2 2 2 5
GO:0031507 heterochromatin assembly 55 16 12 3 2 2 3 3 3 3 2 3 4 3 3 4 2 3
GO:0043966 histone H3 acetylation 54 16 6 3 3 2 1 3 2 4 4 5 4 3 3 4 4 3
GO:0045910 negative regulation of DNA recombination 54 16 7 3 3 3 3 4 3 4 4 2 3 4 2 2 2 5
GO:0061077 chaperone-mediated protein folding 54 16 5 3 2 3 3 3 6 3 3 3 3 3 4 3 3 4
GO:0000018 regulation of DNA recombination 54 16 7 3 3 3 3 4 3 4 4 2 3 4 2 2 2 5
GO:0006423 cysteinyl-tRNA aminoacylation 53 16 3 3 3 2 2 3 2 3 3 5 4 3 2 2 6 7
GO:0051103 DNA ligation involved in DNA repair 53 16 4 3 3 4 3 5 2 3 4 2 3 3 3 4 3 4
GO:2000756 regulation of peptidyl-lysine acetylation 52 16 4 3 4 2 2 4 2 3 4 4 4 2 3 4 4 3
GO:0043247 telomere maintenance in response to DNA damage 52 1 52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
GO:0017006 protein-tetrapyrrole linkage 52 14 7 2 4 0 2 3 0 5 5 4 2 6 2 4 2 4
GO:1901983 regulation of protein acetylation 52 16 4 3 4 2 2 4 2 3 4 4 4 2 3 4 4 3
GO:0035065 regulation of histone acetylation 52 16 4 3 4 2 2 4 2 3 4 4 4 2 3 4 4 3
GO:0000478 endonucleolytic cleavage involved in rRNA processing 50 16 17 2 2 2 1 2 1 2 3 3 2 3 2 4 2 2
GO:0006431 methionyl-tRNA aminoacylation 50 16 2 3 4 2 4 3 2 3 5 3 3 3 3 2 4 4
GO:0006424 glutamyl-tRNA aminoacylation 50 16 5 2 2 2 3 3 3 3 6 4 3 4 3 2 1 4
GO:0045739 positive regulation of DNA repair 50 16 4 3 3 3 3 4 1 3 3 2 4 4 3 3 2 5
GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic 50 16 17 2 2 2 1 2 1 2 3 3 2 3 2 4 2 2
GO:0018065 protein-cofactor linkage 49 16 4 2 2 5 2 1 1 4 7 4 5 4 1 1 1 5
GO:0043484 regulation of RNA splicing 49 13 6 3 2 0 5 2 0 4 5 3 4 2 4 0 4 5
GO:0009252 peptidoglycan biosynthetic process 49 16 1 1 11 5 1 2 1 1 9 6 1 2 1 4 2 1
GO:0017182 peptidyl-diphthamide metabolic process 48 16 3 3 2 3 3 3 3 3 3 3 4 4 2 3 3 3
GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine 48 16 3 3 2 3 3 3 3 3 3 3 4 4 2 3 3 3
GO:0080111 DNA demethylation 47 16 4 2 4 3 3 2 1 3 3 1 3 4 3 5 3 3
GO:0035510 DNA dealkylation 47 16 4 2 4 3 3 2 1 3 3 1 3 4 3 5 3 3
GO:0052541 plant-type cell wall cellulose metabolic process 46 14 24 1 2 0 1 3 0 1 1 1 4 1 1 3 2 1
GO:0031053 primary miRNA processing 46 16 5 3 3 3 3 2 2 3 3 3 3 2 3 3 2 3
GO:0006435 threonyl-tRNA aminoacylation 45 16 4 2 3 2 2 3 2 2 2 6 3 2 2 4 5 1
GO:0006433 prolyl-tRNA aminoacylation 45 16 3 2 3 4 2 5 2 2 3 2 4 3 3 3 2 2
GO:0016574 histone ubiquitination 45 16 4 3 3 2 1 4 2 3 3 3 3 3 2 3 3 3
GO:0033169 histone H3-K9 demethylation 45 15 4 2 3 4 3 3 0 2 3 3 5 2 2 2 4 3
GO:0033523 histone H2B ubiquitination 45 16 4 3 3 2 1 4 2 3 3 3 3 3 2 3 3 3
GO:0018212 peptidyl-tyrosine modification 43 15 23 0 1 1 1 1 1 4 4 1 1 1 1 1 1 1
GO:0000413 protein peptidyl-prolyl isomerization 43 13 28 1 0 1 1 0 1 1 0 1 1 1 1 2 1 3
GO:0000738 DNA catabolic process, exonucleolytic 43 14 3 3 3 0 4 2 0 3 3 3 4 3 3 3 3 3
GO:0010731 protein glutathionylation 43 16 6 2 3 1 3 5 1 2 2 2 4 1 2 4 3 2
GO:0001682 tRNA 5'-leader removal 43 16 3 2 3 2 2 5 2 2 3 3 3 2 2 2 5 2
GO:0016073 snRNA metabolic process 43 16 2 2 3 1 2 2 1 2 2 6 7 2 5 2 2 2
GO:0008616 queuosine biosynthetic process 42 15 0 2 3 2 2 3 3 2 6 4 5 2 2 2 2 2
GO:0045493 xylan catabolic process 42 16 3 3 3 1 3 3 1 3 3 2 3 3 3 3 3 2
GO:0051574 positive regulation of histone H3-K9 methylation 42 15 3 3 3 0 3 3 1 3 3 2 3 3 3 3 3 3
GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 41 16 6 1 3 4 3 2 3 2 1 4 4 2 1 2 2 1
GO:0010239 chloroplast mRNA processing 41 15 3 3 3 0 3 2 1 3 3 3 4 2 2 3 3 3
GO:0010306 rhamnogalacturonan II biosynthetic process 41 16 6 3 2 1 1 3 1 2 3 2 4 2 2 3 4 2
GO:0006436 tryptophanyl-tRNA aminoacylation 41 16 2 2 3 2 2 3 2 3 4 2 3 4 2 2 2 3
GO:0010581 regulation of starch biosynthetic process 41 16 4 3 2 2 3 2 2 3 3 2 3 3 3 1 2 3
GO:0032877 positive regulation of DNA endoreduplication 41 16 4 3 2 2 3 3 1 2 2 2 3 3 2 2 3 4
GO:2000105 positive regulation of DNA-dependent DNA replication 41 16 4 3 2 2 3 3 1 2 2 2 3 3 2 2 3 4
GO:0018108 peptidyl-tyrosine phosphorylation 40 15 23 0 1 1 1 1 1 4 1 1 1 1 1 1 1 1
GO:0018198 peptidyl-cysteine modification 40 16 2 2 2 4 2 2 2 2 3 4 3 3 2 2 2 3
GO:0010289 homogalacturonan biosynthetic process 40 14 3 3 2 0 3 3 0 3 3 2 3 3 3 3 3 3
GO:0006422 aspartyl-tRNA aminoacylation 40 16 2 2 6 1 3 3 7 2 2 1 1 1 5 1 1 2
GO:0010599 production of lsiRNA involved in RNA interference 40 15 3 3 2 2 3 3 0 3 3 2 3 2 3 3 3 2
GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening 39 16 6 1 3 3 3 2 2 2 1 4 4 2 1 2 2 1
GO:2000757 negative regulation of peptidyl-lysine acetylation 39 16 3 2 3 1 2 3 1 2 3 3 3 2 2 3 3 3
GO:0031057 negative regulation of histone modification 39 16 3 2 3 1 2 3 1 2 3 3 3 2 2 3 3 3
GO:1901984 negative regulation of protein acetylation 39 16 3 2 3 1 2 3 1 2 3 3 3 2 2 3 3 3
GO:0035067 negative regulation of histone acetylation 39 16 3 2 3 1 2 3 1 2 3 3 3 2 2 3 3 3
GO:0031440 regulation of mRNA 3'-end processing 39 16 4 1 3 3 4 2 1 2 1 3 3 2 1 3 3 3
GO:0006427 histidyl-tRNA aminoacylation 38 16 3 2 3 1 2 2 2 2 3 2 5 2 2 2 3 2
GO:0006269 DNA replication, synthesis of RNA primer 38 16 3 3 2 2 2 2 3 2 2 3 3 1 3 2 2 3
GO:1901259 chloroplast rRNA processing 38 16 3 3 3 1 2 2 2 3 2 2 3 2 2 3 3 2
GO:0018027 peptidyl-lysine dimethylation 37 14 3 3 3 0 2 3 0 3 3 1 3 3 2 3 3 2
GO:1900109 regulation of histone H3-K9 dimethylation 37 14 3 3 3 0 2 3 0 3 3 1 3 3 2 3 3 2
GO:0010833 telomere maintenance via telomere lengthening 37 16 4 2 2 1 3 2 3 2 2 1 3 2 3 2 3 2
GO:0034227 tRNA thio-modification 37 16 4 2 1 2 1 4 1 3 3 2 3 2 2 3 2 2
GO:0036123 histone H3-K9 dimethylation 37 14 3 3 3 0 2 3 0 3 3 1 3 3 2 3 3 2
GO:0007004 telomere maintenance via telomerase 37 16 4 2 2 1 3 2 3 2 2 1 3 2 3 2 3 2
GO:0016255 attachment of GPI anchor to protein 36 16 2 2 1 2 3 2 2 2 2 2 5 2 2 2 2 3
GO:0009303 rRNA transcription 36 16 3 3 2 3 2 3 1 1 3 2 2 2 2 2 3 2
GO:0018196 peptidyl-asparagine modification 35 15 1 1 4 1 1 3 0 1 1 2 12 1 2 1 2 2
GO:0018279 protein N-linked glycosylation via asparagine 35 15 1 1 4 1 1 3 0 1 1 2 12 1 2 1 2 2
GO:0000719 photoreactive repair 35 16 3 3 2 2 2 2 2 3 1 3 2 1 2 3 2 2
GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline 35 14 11 2 2 0 2 1 1 2 2 2 2 2 2 2 2 0
GO:0019511 peptidyl-proline hydroxylation 35 14 11 2 2 0 2 1 1 2 2 2 2 2 2 2 2 0
GO:0070932 histone H3 deacetylation 35 16 12 1 1 2 1 3 1 1 1 3 1 2 2 1 1 2
GO:0070933 histone H4 deacetylation 35 16 12 1 1 2 1 3 1 1 1 3 1 2 2 1 1 2
GO:0000380 alternative mRNA splicing, via spliceosome 34 15 4 2 1 1 2 4 0 2 2 1 3 2 3 1 3 3
GO:0018343 protein farnesylation 34 16 2 2 2 2 2 4 2 2 2 2 2 2 2 2 2 2
GO:0006271 DNA strand elongation involved in DNA replication 34 15 4 2 2 2 2 2 2 3 2 0 1 2 2 3 3 2
GO:0022616 DNA strand elongation 34 15 4 2 2 2 2 2 2 3 2 0 1 2 2 3 3 2
GO:0045116 protein neddylation 34 16 5 1 1 1 2 3 2 2 1 3 2 3 1 2 1 4
GO:0032042 mitochondrial DNA metabolic process 33 16 6 2 1 2 2 2 1 2 3 2 2 1 1 1 2 3
GO:0000959 mitochondrial RNA metabolic process 33 12 15 1 2 0 1 0 0 0 2 1 2 2 2 2 2 1
GO:0016180 snRNA processing 33 16 2 2 3 1 2 2 1 2 2 2 3 2 3 2 2 2
GO:0000291 nuclear-transcribed mRNA catabolic process, exonucleolytic 32 16 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2 2
GO:0018149 peptide cross-linking 32 15 3 1 1 1 1 1 0 1 1 1 1 1 1 16 1 1
GO:0043405 regulation of MAP kinase activity 32 16 16 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1
GO:0006273 lagging strand elongation 32 15 2 2 2 2 2 2 2 3 2 0 1 2 2 3 3 2
GO:2000539 regulation of protein geranylgeranylation 31 16 1 3 1 1 1 1 1 1 1 1 4 1 6 1 1 6
GO:2000541 positive regulation of protein geranylgeranylation 31 16 1 3 1 1 1 1 1 1 1 1 4 1 6 1 1 6
GO:0006458 'de novo' protein folding 31 16 2 2 2 1 2 2 1 2 2 2 2 2 3 2 2 2
GO:0006481 C-terminal protein methylation 31 16 3 1 2 4 1 2 1 1 1 2 4 1 1 2 4 1
GO:0010424 DNA methylation on cytosine within a CG sequence 31 15 6 2 1 1 2 2 0 1 2 2 2 2 2 2 2 2
GO:0018410 C-terminal protein amino acid modification 31 16 3 1 2 4 1 2 1 1 1 2 4 1 1 2 4 1
GO:0031145 anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process 31 16 4 1 5 1 1 3 1 1 1 2 3 1 1 2 3 1
GO:0051085 chaperone mediated protein folding requiring cofactor 31 16 2 2 2 1 2 2 1 2 2 2 2 2 3 2 2 2
GO:0051084 'de novo' posttranslational protein folding 31 16 2 2 2 1 2 2 1 2 2 2 2 2 3 2 2 2
GO:0000244 spliceosomal tri-snRNP complex assembly 30 16 2 1 1 1 1 2 1 2 3 1 4 2 2 4 1 2
GO:0010395 rhamnogalacturonan I metabolic process 30 16 2 2 2 1 2 2 1 2 2 2 2 2 2 2 2 2
GO:0043407 negative regulation of MAP kinase activity 30 16 15 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:0032210 regulation of telomere maintenance via telomerase 29 16 2 2 1 1 2 2 2 2 2 1 2 2 2 2 2 2
GO:0000729 DNA double-strand break processing 29 14 2 2 2 0 3 1 0 2 2 2 3 2 2 2 2 2
GO:0071897 DNA biosynthetic process 29 16 4 2 2 2 1 2 1 2 1 2 2 2 1 2 2 1
GO:0000706 meiotic DNA double-strand break processing 29 14 2 2 2 0 3 1 0 2 2 2 3 2 2 2 2 2
GO:0010390 histone monoubiquitination 29 16 2 2 2 1 1 3 1 2 2 1 2 2 2 2 2 2
GO:0006420 arginyl-tRNA aminoacylation 29 16 2 2 3 1 1 1 3 2 5 1 1 1 2 1 1 2
GO:0080120 CAAX-box protein maturation 29 15 2 2 1 2 1 3 0 2 2 3 2 2 1 1 1 4
GO:0006344 maintenance of chromatin silencing 29 15 2 2 2 0 2 2 1 2 2 1 2 2 2 3 2 2
GO:0080058 protein deglutathionylation 28 14 2 2 2 0 2 2 0 2 2 2 2 2 2 2 2 2
GO:0090239 regulation of histone H4 acetylation 28 16 2 2 2 1 1 2 2 2 2 2 2 1 2 2 2 1
GO:0019985 translesion synthesis 28 16 3 2 2 2 1 2 1 2 1 2 2 2 1 2 2 1
GO:1900111 positive regulation of histone H3-K9 dimethylation 27 14 2 2 2 0 2 2 0 2 2 1 2 2 2 2 2 2
GO:0043620 regulation of DNA-dependent transcription in response to stress 27 14 4 1 2 0 1 2 0 2 2 4 2 1 1 2 2 1
GO:0048024 regulation of mRNA splicing, via spliceosome 27 13 3 1 1 0 3 1 0 2 3 1 2 2 3 0 2 3
GO:1900864 mitochondrial RNA modification 27 10 14 0 2 0 1 0 0 0 1 0 2 2 1 2 1 1
GO:0032951 regulation of beta-glucan biosynthetic process 27 16 4 1 1 1 1 2 1 1 1 2 3 1 3 2 2 1
GO:0032950 regulation of beta-glucan metabolic process 27 16 4 1 1 1 1 2 1 1 1 2 3 1 3 2 2 1
GO:0042779 tRNA 3'-trailer cleavage 27 16 2 2 1 4 1 1 3 1 1 3 2 1 1 2 1 1
GO:0042276 error-prone translesion synthesis 27 16 2 2 2 2 1 2 1 2 1 2 2 2 1 2 2 1
GO:0010520 regulation of reciprocal meiotic recombination 26 15 2 2 2 2 1 2 2 2 2 1 2 2 1 0 1 2
GO:2001006 regulation of cellulose biosynthetic process 26 16 3 1 1 1 1 2 1 1 1 2 3 1 3 2 2 1
GO:0045128 negative regulation of reciprocal meiotic recombination 26 15 2 2 2 2 1 2 2 2 2 1 2 2 1 0 1 2
GO:0009249 protein lipoylation 26 11 3 1 1 3 1 0 0 3 5 1 3 2 0 0 0 3
GO:0010501 RNA secondary structure unwinding 25 16 2 1 2 1 1 3 1 1 1 2 4 1 1 2 1 1
GO:0006425 glutaminyl-tRNA aminoacylation 25 16 1 1 2 1 1 2 1 2 2 1 2 2 2 1 2 2
GO:0045005 maintenance of fidelity involved in DNA-dependent DNA replication 25 16 2 2 3 1 1 1 1 2 1 2 3 1 2 1 1 1
GO:0006360 transcription from RNA polymerase I promoter 25 16 3 1 2 1 1 2 1 1 1 2 2 1 1 1 4 1
GO:0016233 telomere capping 25 12 3 2 0 0 3 1 0 3 3 2 1 2 2 2 1 0
GO:0032786 positive regulation of DNA-dependent transcription, elongation 25 16 2 1 3 1 1 1 1 1 1 2 3 1 1 1 1 4
GO:0070526 threonylcarbamoyladenosine biosynthetic process 25 16 1 1 1 3 1 2 2 2 4 1 1 1 1 1 1 2
GO:1900151 regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay 24 13 3 0 2 2 3 1 1 1 0 2 3 1 0 2 2 1
GO:0051972 regulation of telomerase activity 24 13 3 1 2 0 2 1 0 1 0 2 2 2 2 2 2 2
GO:0051973 positive regulation of telomerase activity 24 13 3 1 2 0 2 1 0 1 0 2 2 2 2 2 2 2
GO:0061013 regulation of mRNA catabolic process 24 13 3 0 2 2 3 1 1 1 0 2 3 1 0 2 2 1
GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening 24 13 3 0 2 2 3 1 1 1 0 2 3 1 0 2 2 1
GO:0018160 peptidyl-pyrromethane cofactor linkage 23 16 1 1 1 2 1 1 1 1 2 3 2 2 1 1 1 2
GO:0034982 mitochondrial protein processing 23 13 3 1 2 0 1 1 0 1 0 1 3 2 2 2 2 2
GO:0010213 non-photoreactive DNA repair 23 16 2 2 2 1 1 2 1 2 1 1 1 2 1 1 1 2
GO:0006627 protein processing involved in protein targeting to mitochondrion 23 13 3 1 2 0 1 1 0 1 0 1 3 2 2 2 2 2
GO:0030490 maturation of SSU-rRNA 23 14 9 1 1 2 1 1 0 1 0 1 1 1 1 1 1 1
GO:0045900 negative regulation of translational elongation 23 15 1 1 2 1 1 2 0 1 1 3 2 1 2 1 1 3
GO:0016553 base conversion or substitution editing 23 11 6 0 2 1 0 0 0 1 1 0 2 2 2 3 2 1
GO:0034421 post-translational protein acetylation 22 16 1 1 1 1 1 1 1 2 2 1 1 1 1 2 2 3
GO:0061087 positive regulation of histone H3-K27 methylation 22 13 2 1 1 0 2 2 0 1 1 0 2 2 2 2 2 2
GO:0061085 regulation of histone H3-K27 methylation 22 13 2 1 1 0 2 2 0 1 1 0 2 2 2 2 2 2
GO:0035335 peptidyl-tyrosine dephosphorylation 22 15 8 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1
GO:0051569 regulation of histone H3-K4 methylation 22 13 2 1 1 0 2 2 0 1 1 0 2 2 2 2 2 2
GO:0051571 positive regulation of histone H3-K4 methylation 22 13 2 1 1 0 2 2 0 1 1 0 2 2 2 2 2 2
GO:0071586 CAAX-box protein processing 21 15 1 1 1 1 1 2 0 1 2 2 2 1 1 1 1 3
GO:0010452 histone H3-K36 methylation 21 14 3 1 1 0 2 2 0 1 1 1 2 2 1 2 1 1
GO:0006359 regulation of transcription from RNA polymerase III promoter 21 16 1 2 1 1 1 3 1 1 1 2 1 2 1 1 1 1
GO:0016598 protein arginylation 21 15 2 1 3 1 1 1 0 1 2 1 2 2 1 1 1 1
GO:0016480 negative regulation of transcription from RNA polymerase III promoter 21 16 1 2 1 1 1 3 1 1 1 2 1 2 1 1 1 1
GO:0042964 thioredoxin biosynthetic process 21 16 2 1 1 1 2 1 1 2 1 1 2 2 1 1 1 1
GO:0033567 DNA replication, Okazaki fragment processing 21 15 2 1 2 1 1 1 2 2 1 0 1 1 1 2 2 1
GO:0007023 post-chaperonin tubulin folding pathway 21 16 1 1 1 3 1 1 1 1 1 1 2 2 2 1 1 1
GO:0071951 conversion of methionyl-tRNA to N-formyl-methionyl-tRNA 20 16 1 1 1 2 1 2 1 1 3 1 1 1 1 1 1 1
GO:0071108 protein K48-linked deubiquitination 20 15 3 1 1 1 1 1 0 1 1 1 1 2 1 1 1 3
GO:0034243 regulation of transcription elongation from RNA polymerase II promoter 20 15 1 1 3 2 1 1 1 1 1 2 1 1 1 2 0 1
GO:0043968 histone H2A acetylation 20 16 1 1 1 1 1 1 1 1 1 2 1 1 2 1 2 2
GO:0006368 transcription elongation from RNA polymerase II promoter 20 15 1 1 3 2 1 1 1 1 1 2 1 1 1 2 0 1
GO:0070536 protein K63-linked deubiquitination 20 15 3 1 1 1 1 1 0 1 1 1 1 2 1 1 1 3
GO:0009301 snRNA transcription 20 16 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5 1
GO:0019988 charged-tRNA amino acid modification 20 16 1 1 1 2 1 2 1 1 3 1 1 1 1 1 1 1
GO:0006437 tyrosyl-tRNA aminoacylation 19 16 1 2 1 1 1 1 3 1 1 1 1 1 1 1 1 1
GO:0080156 mitochondrial mRNA modification 19 7 12 0 1 0 0 0 0 0 0 0 1 1 1 2 1 0
GO:0001934 positive regulation of protein phosphorylation 19 13 6 1 0 1 1 1 0 1 2 1 0 1 1 1 1 1
GO:0006348 chromatin silencing at telomere 19 16 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 3
GO:0045860 positive regulation of protein kinase activity 19 13 6 1 0 1 1 1 0 1 2 1 0 1 1 1 1 1
GO:0035279 mRNA cleavage involved in gene silencing by miRNA 19 14 6 1 1 1 1 1 0 1 1 1 1 0 1 1 1 1
GO:0018023 peptidyl-lysine trimethylation 18 12 2 0 0 2 1 1 2 1 3 1 2 1 1 0 0 1
GO:0018106 peptidyl-histidine phosphorylation 18 4 3 0 12 0 0 0 0 0 1 0 0 0 0 2 0 0
GO:0034472 snRNA 3'-end processing 18 16 1 1 1 1 1 1 1 1 1 1 2 1 2 1 1 1
GO:0034477 U6 snRNA 3'-end processing 18 16 1 1 1 1 1 1 1 1 1 1 2 1 2 1 1 1
GO:0006264 mitochondrial DNA replication 18 11 5 1 0 1 1 1 0 1 2 2 1 0 0 0 1 2
GO:0070475 rRNA base methylation 18 14 2 1 1 1 0 1 1 2 1 2 1 0 1 1 2 1
GO:0017009 protein-phycocyanobilin linkage 18 14 1 1 1 0 1 2 0 1 1 3 1 2 1 1 1 1
GO:0017007 protein-bilin linkage 18 14 1 1 1 0 1 2 0 1 1 3 1 2 1 1 1 1
GO:0017003 protein-heme linkage 18 14 1 1 2 0 1 1 0 1 2 1 1 1 1 2 1 2
GO:0090308 regulation of methylation-dependent chromatin silencing 18 14 4 1 1 0 1 1 0 1 1 2 1 1 1 1 1 1
GO:0090309 positive regulation of methylation-dependent chromatin silencing 18 14 4 1 1 0 1 1 0 1 1 2 1 1 1 1 1 1
GO:0031937 positive regulation of chromatin silencing 18 14 4 1 1 0 1 1 0 1 1 2 1 1 1 1 1 1
GO:0032434 regulation of proteasomal ubiquitin-dependent protein catabolic process 17 10 3 1 3 0 0 0 1 1 1 0 3 1 0 1 2 0
GO:0000733 DNA strand renaturation 17 16 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1
GO:0000730 DNA recombinase assembly 17 16 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1
GO:0000707 meiotic DNA recombinase assembly 17 16 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1
GO:0034975 protein folding in endoplasmic reticulum 17 15 1 1 1 0 1 2 1 1 1 1 1 1 1 2 1 1
GO:0006450 regulation of translational fidelity 17 15 2 1 1 1 1 1 0 1 1 1 1 1 2 1 1 1
GO:0006493 protein O-linked glycosylation 17 11 2 1 0 0 1 2 0 1 3 0 0 1 1 2 1 2
GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress 17 14 2 1 1 0 1 1 0 1 1 3 1 1 1 1 1 1
GO:0043144 snoRNA processing 17 16 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:0016074 snoRNA metabolic process 17 16 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:0061136 regulation of proteasomal protein catabolic process 17 10 3 1 3 0 0 0 1 1 1 0 3 1 0 1 2 0
GO:0018199 peptidyl-glutamine modification 16 16 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:0018345 protein palmitoylation 16 14 2 1 1 0 1 2 0 1 1 1 1 1 1 1 1 1
GO:0010246 rhamnogalacturonan I biosynthetic process 16 16 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:0043619 regulation of transcription from RNA polymerase II promoter in response to oxidative stress 16 14 1 1 1 0 1 1 0 1 1 3 1 1 1 1 1 1
GO:0006517 protein deglycosylation 16 15 2 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1
GO:0036292 DNA rewinding 16 16 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:0006279 premeiotic DNA replication 16 16 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:0070212 protein poly-ADP-ribosylation 16 15 2 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1
GO:0048478 replication fork protection 16 15 1 2 1 1 1 1 1 1 1 0 1 1 1 1 1 1
GO:0090042 tubulin deacetylation 16 16 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase 16 16 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:0031396 regulation of protein ubiquitination 16 10 3 1 2 1 0 1 0 0 1 1 3 0 0 2 1 0
GO:0000012 single strand break repair 16 16 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:0000381 regulation of alternative mRNA splicing, via spliceosome 15 11 2 1 0 0 2 1 0 1 1 0 1 1 1 0 2 2
GO:0000209 protein polyubiquitination 15 15 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:0018107 peptidyl-threonine phosphorylation 15 15 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1
GO:0018210 peptidyl-threonine modification 15 15 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1
GO:0018282 metal incorporation into metallo-sulfur cluster 15 15 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1
GO:0018283 iron incorporation into metallo-sulfur cluster 15 15 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1
GO:0032205 negative regulation of telomere maintenance 15 15 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1
GO:0032211 negative regulation of telomere maintenance via telomerase 15 15 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1
GO:0018316 peptide cross-linking via L-cystine 15 15 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1
GO:1900363 regulation of mRNA polyadenylation 15 14 1 1 1 1 1 1 0 1 1 1 0 1 1 1 1 2
GO:0010493 Lewis a epitope biosynthetic process 15 14 2 1 1 0 1 1 0 1 1 1 1 1 1 1 1 1
GO:0071076 RNA 3' uridylation 15 15 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1
GO:0080009 mRNA methylation 15 15 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1
GO:1901535 regulation of DNA demethylation 15 15 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1
GO:0072355 histone H3-T3 phosphorylation 15 15 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1
GO:0050730 regulation of peptidyl-tyrosine phosphorylation 15 15 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:0050732 negative regulation of peptidyl-tyrosine phosphorylation 15 15 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1
GO:0090241 negative regulation of histone H4 acetylation 15 15 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1
GO:0035405 histone-threonine phosphorylation 15 15 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1
GO:0035407 histone H3-T11 phosphorylation 15 15 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1
GO:0009304 tRNA transcription 15 14 1 1 1 1 1 1 0 1 1 1 1 2 1 0 1 1
GO:0009299 mRNA transcription 15 8 4 1 2 0 0 1 0 0 0 2 2 2 0 0 1 0
GO:0031554 regulation of DNA-dependent transcription, termination 15 15 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1
GO:0031555 transcriptional attenuation 15 15 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1
GO:0000122 negative regulation of transcription from RNA polymerase II promoter 15 11 0 1 0 0 1 2 0 1 1 0 1 1 1 2 1 3
GO:0031564 transcription antitermination 15 15 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1
GO:0034720 histone H3-K4 demethylation 14 14 1 1 1 1 1 1 1 0 0 1 1 1 1 1 1 1
GO:0018063 cytochrome c-heme linkage 14 14 1 1 1 0 1 1 0 1 1 1 1 1 1 1 1 1
GO:0000488 maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) 14 14 1 1 1 1 1 1 0 1 0 1 1 1 1 1 1 1
GO:0000489 maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) 14 14 1 1 1 1 1 1 0 1 0 1 1 1 1 1 1 1
GO:0000470 maturation of LSU-rRNA 14 14 1 1 1 1 1 1 0 1 0 1 1 1 1 1 1 1
GO:0032206 positive regulation of telomere maintenance 14 14 1 1 0 0 1 1 1 1 1 1 1 1 1 1 1 1
GO:0032212 positive regulation of telomere maintenance via telomerase 14 14 1 1 0 0 1 1 1 1 1 1 1 1 1 1 1 1
GO:0045990 carbon catabolite regulation of transcription 14 14 1 1 1 0 1 1 0 1 1 1 1 1 1 1 1 1
GO:0010400 rhamnogalacturonan I side chain metabolic process 14 14 1 1 1 0 1 1 0 1 1 1 1 1 1 1 1 1
GO:0043686 co-translational protein modification 14 14 1 1 0 1 1 0 1 1 1 1 1 1 1 1 1 1
GO:0045014 negative regulation of transcription by glucose 14 14 1 1 1 0 1 1 0 1 1 1 1 1 1 1 1 1
GO:0045013 carbon catabolite repression of transcription 14 14 1 1 1 0 1 1 0 1 1 1 1 1 1 1 1 1
GO:0001881 receptor recycling 14 14 1 1 1 1 0 1 0 1 1 1 1 1 1 1 1 1
GO:0043112 receptor metabolic process 14 14 1 1 1 1 0 1 0 1 1 1 1 1 1 1 1 1
GO:0016578 histone deubiquitination 14 13 1 1 1 0 1 1 0 1 1 1 2 0 1 1 1 1
GO:0031063 regulation of histone deacetylation 14 14 1 1 1 1 1 1 0 1 1 1 1 0 1 1 1 1
GO:0031125 rRNA 3'-end processing 14 10 5 1 0 1 0 0 1 0 0 1 1 1 1 1 1 0
GO:0042794 rRNA transcription from plastid promoter 14 14 1 1 1 1 1 1 0 1 1 0 1 1 1 1 1 1
GO:0046015 regulation of transcription by glucose 14 14 1 1 1 0 1 1 0 1 1 1 1 1 1 1 1 1
GO:0090311 regulation of protein deacetylation 14 14 1 1 1 1 1 1 0 1 1 1 1 0 1 1 1 1
GO:0070919 production of siRNA involved in chromatin silencing by small RNA 14 10 3 1 1 1 2 0 0 0 1 1 1 1 0 0 2 0
GO:0035970 peptidyl-threonine dephosphorylation 14 14 1 1 1 0 1 1 0 1 1 1 1 1 1 1 1 1
GO:0018195 peptidyl-arginine modification 13 10 3 1 0 1 1 1 1 0 1 2 0 0 1 0 0 1
GO:0018216 peptidyl-arginine methylation 13 10 3 1 0 1 1 1 1 0 1 2 0 0 1 0 0 1
GO:0006987 activation of signaling protein activity involved in unfolded protein response 13 13 1 1 0 1 1 1 0 1 1 1 0 1 1 1 1 1
GO:0036290 protein trans-autophosphorylation 13 13 1 1 1 0 1 1 0 1 1 0 1 1 1 1 1 1
GO:0033259 plastid DNA replication 13 11 2 1 0 1 1 1 0 1 1 2 1 0 0 0 1 1
GO:0033258 plastid DNA metabolic process 13 11 2 1 0 1 1 1 0 1 1 2 1 0 0 0 1 1
GO:2000232 regulation of rRNA processing 13 13 1 1 0 1 0 1 1 0 1 1 1 1 1 1 1 1
GO:2000234 positive regulation of rRNA processing 13 13 1 1 0 1 0 1 1 0 1 1 1 1 1 1 1 1
GO:0042787 protein ubiquitination involved in ubiquitin-dependent protein catabolic process 13 2 12 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0
GO:0035247 peptidyl-arginine omega-N-methylation 13 10 3 1 0 1 1 1 1 0 1 2 0 0 1 0 0 1
GO:0035246 peptidyl-arginine N-methylation 13 10 3 1 0 1 1 1 1 0 1 2 0 0 1 0 0 1
GO:0019919 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine 13 10 3 1 0 1 1 1 1 0 1 2 0 0 1 0 0 1
GO:0031508 centromeric heterochromatin assembly 13 13 1 1 0 0 1 1 0 1 1 1 1 1 1 1 1 1
GO:0000354 cis assembly of pre-catalytic spliceosome 12 10 2 1 1 1 0 0 1 1 0 0 2 1 1 0 0 1
GO:0018315 molybdenum incorporation into molybdenum-molybdopterin complex 12 9 2 0 0 2 0 1 0 1 1 1 0 0 1 1 0 2
GO:0016554 cytidine to uridine editing 12 7 5 0 1 0 0 0 0 0 0 0 1 1 1 2 1 0
GO:0042040 metal incorporation into metallo-molybdopterin complex 12 9 2 0 0 2 0 1 0 1 1 1 0 0 1 1 0 2
GO:0009244 lipopolysaccharide core region biosynthetic process 12 8 1 0 1 0 0 1 0 0 4 0 2 1 1 0 1 0