Gene: VV13G03130 (Vitis vinifera)

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Gene Identifier
VV13G03130
Transcript Identifier
VV13G03130.1
Gene Type
Coding gene
Location
chr13 : 5615546-5625464 : negative

Family

Gene family
HOM03M004546
(21 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
decapping enzyme subunit 2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidGSVIVG01016273001

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016441ISOPLAZA Integrative Orthologyposttranscriptional gene silencingAT5G13570
GO:0010072ISOPLAZA Integrative Orthologyprimary shoot apical meristem specificationAT5G13570
GO:0009791ISOPLAZA Integrative Orthologypost-embryonic developmentAT5G13570
GO:0006402ISOPLAZA Integrative OrthologymRNA catabolic processAT5G13570
GO:0031087ISOPLAZA Integrative Orthologydeadenylation-independent decapping of nuclear-transcribed mRNAAT5G13570

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0030145IEAInterPromanganese ion binding
GO:0016787IEAInterProhydrolase activity
GO:0003723IEAInterProRNA binding
GO:0003729ISOPLAZA Integrative OrthologymRNA bindingAT5G13570
GO:0000287ISOPLAZA Integrative Orthologymagnesium ion bindingAT5G13570
GO:0042803ISOPLAZA Integrative Orthologyprotein homodimerization activityAT5G13570
GO:0050072ISOPLAZA Integrative Orthologym7G(5')pppN diphosphatase activityAT5G13570
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G13570

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT5G13570
GO:0000932ISOPLAZA Integrative Orthologycytoplasmic mRNA processing bodyAT5G13570

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015797NUDIX hydrolase domain-like
IPR007722mRNA decapping protein 2, Box A
IPR000086NUDIX hydrolase domain
IPR020084NUDIX hydrolase, conserved site

Mapman id Description
27.1RNA.processing
33.99development.unspecified
No SignalP domains detected for this gene.