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WorkbenchGene: VV08G11560 (Vitis vinifera)
Overview 
- Gene Identifier
- VV08G11560
- Transcript Identifier
- VV08G11560.1
- Gene Type
- Coding gene
- Location
- chr8 : 17800315-17802467 : positive
Family
- Gene family
- Duplication type
- Block duplicate
Descriptions
- Description (AnnoMine)
-
Trihelix transcription factor PTL
Description of best ortholog(s):
Identifiers
| Identifier | Name |
|---|---|
| pid | GSVIVG01033792001 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0090428 | ISO | PLAZA Integrative Orthology | perianth development | AT5G03680 |
| GO:0048442 | ISO | PLAZA Integrative Orthology | sepal development | AT5G03680 |
| GO:0009909 | ISO | PLAZA Integrative Orthology | regulation of flower development | AT5G03680 |
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT5G03680 |
| GO:0046621 | ISO | PLAZA Integrative Orthology | negative regulation of organ growth | AT5G03680 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-dependent | AT5G03680 AT3G10000 |
| GO:0048498 | ISO | PLAZA Integrative Orthology | establishment of petal orientation | AT5G03680 |
| GO:0048441 | ISO | PLAZA Integrative Orthology | petal development | AT5G03680 |
| GO:0010197 | ISO | PLAZA Integrative Orthology | polar nucleus fusion | AT3G10000 |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0003682 | IEA | InterPro | chromatin binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003700 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding transcription factor activity | AT5G03680 |
Cellular Component
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G03680 |
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
| Mapman id | Description |
|---|---|
| 27.3.30 | RNA.regulation of transcription.Trihelix, Triple-Helix transcription factor family |
No SignalP domains detected for this gene.