PLAZA 3.0 Monocots gene overview : VV03G02980

Gene: VV03G02980 (Vitis vinifera)

Overview

Gene Identifier: VV03G02980
Transcript Identifier: VV03G02980.1
Gene Type: Coding gene
Location: chr3 : 3143106-3150947 : positive

Family

Gene family: HOM03M005092
(19 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine): SUMO-activating enzyme subunit 2

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	GSVIVG01023831001

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006464	IEA	InterPro	cellular protein modification process
GO:0016925	ISO	PLAZA Integrative Orthology	protein sumoylation	AT2G21470
GO:0009793	ISO	PLAZA Integrative Orthology	embryo development ending in seed dormancy	AT2G21470
GO:0036211	IEA	PLAZA Homology	protein modification process	HOM03M005092

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0008641	IEA	InterPro	small protein activating enzyme activity
GO:0003824	IEA	InterPro	catalytic activity
GO:0005524	IEA	InterPro	ATP binding
GO:0019948	ISO	PLAZA Integrative Orthology	SUMO activating enzyme activity	AT2G21470
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT2G21470

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT2G21470
GO:0009506	ISO	PLAZA Integrative Orthology	plasmodesma	AT2G21470
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT2G21470

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR016040	NAD(P)-binding domain
IPR019572	Ubiquitin-activating enzyme
IPR000594	UBA/THIF-type NAD/FAD binding fold
IPR028077	Ubiquitin/SUMO-activating enzyme ubiquitin-like domain
IPR009036	Molybdenum cofactor biosynthesis, MoeB
IPR023280	Ubiquitin-like 1 activating enzyme, catalytic cysteine domain
IPR000127	Ubiquitin-activating enzyme repeat

Mapman id	Description
29.5.11.2	protein.degradation.ubiquitin.E1

No SignalP domains detected for this gene.