PLAZA 3.0 Monocots gene overview : VV02G03710

Gene: VV02G03710 (Vitis vinifera)

Overview

Gene Identifier: VV02G03710
Transcript Identifier: VV02G03710.1
Gene Type: Coding gene
Location: chr2 : 516045-519370 : negative

Family

Gene family: HOM03M000128
(366 genes in 15 species)
specific family

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Descriptions

Description (AnnoMine): Endoglucanase 20

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	GSVIVG01019420001

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0005975	IEA	InterPro	carbohydrate metabolic process
GO:0009829	ISO	PLAZA Integrative Orthology	cell wall modification involved in fruit ripening	SL08G081620

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003824	IEA	InterPro	catalytic activity
GO:0004553	IEA	InterPro	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016787	IEA	PLAZA Homology	hydrolase activity	HOM03M000128
GO:0016798	IEA	PLAZA Homology	hydrolase activity, acting on glycosyl bonds	HOM03M000128

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR018221	Glycoside hydrolase, family 9, active site
IPR001701	Glycoside hydrolase, family 9
IPR008928	Six-hairpin glycosidase-like
IPR012341	Six-hairpin glycosidase

Mapman id	Description
10.6.1	cell wall.degradation.cellulases and beta -1,4-glucanases
26.3.4	misc.gluco-, galacto- and mannosidases.endoglucanase

SignalP	Description
SignalP-noTM	Signal Peptide detected using noTM network