PLAZA 3.0 Monocots gene overview : VV02G00740

Gene: VV02G00740 (Vitis vinifera)

Overview

Gene Identifier: VV02G00740
Transcript Identifier: VV02G00740.1
Gene Type: Coding gene
Location: chr2 : 5574398-5579214 : positive

Family

Gene family: HOM03M000398
(153 genes in 16 species)
specific family
Subfamily: ORTHO03M001967
(9 genes in 7 species)
specific family
Duplication type: Tandem duplicate

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Descriptions

Description (AnnoMine): Calcineurin B-like protein

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	GSVIVG01004840001

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0010118	ISO	PLAZA Integrative Orthology	stomatal movement	AT5G47100
GO:0010107	ISO	PLAZA Integrative Orthology	potassium ion import	AT5G47100
GO:0009414	ISO	PLAZA Integrative Orthology	response to water deprivation	AT5G47100

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005509	IEA	InterPro	calcium ion binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT5G47100

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	AT5G47100
GO:0005886	ISO	PLAZA Integrative Orthology	plasma membrane	AT5G47100

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR018247	EF-Hand 1, calcium-binding site
IPR011992	EF-hand domain pair
IPR001125	Recoverin like
IPR002048	EF-hand domain

Mapman id	Description
30.3	signalling.calcium

No SignalP domains detected for this gene.