PLAZA 3.0 Monocots gene overview : VV01G10510

Gene: VV01G10510 (Vitis vinifera)

Overview

Gene Identifier: VV01G10510
Transcript Identifier: VV01G10510.1
Gene Type: Coding gene
Location: chr1 : 434060-439421 : positive

Family

Gene family: HOM03M000837
(84 genes in 13 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description (AnnoMine): Ninja-family protein AFP1

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	GSVIVG01012225001

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0009414	ISO	PLAZA Integrative Orthology	response to water deprivation	AT1G13740
GO:0009737	ISO	PLAZA Integrative Orthology	response to abscisic acid	AT1G13740 AT3G02140
GO:0009738	ISO	PLAZA Integrative Orthology	abscisic acid-activated signaling pathway	AT1G69260
GO:0009651	ISO	PLAZA Integrative Orthology	response to salt stress	AT3G02140
GO:0009788	ISO	PLAZA Integrative Orthology	negative regulation of abscisic acid-activated signaling pathway	AT3G02140
GO:0010581	ISO	PLAZA Integrative Orthology	regulation of starch biosynthetic process	AT3G02140

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT1G13740 AT3G29575

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT1G13740 AT1G69260 AT3G02140

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR012463	Ninja

Mapman id	Description
35.2	not assigned.unknown

No SignalP domains detected for this gene.