Gene: SL12G014570 (Solanum lycopersicum)

Overview top

Gene Identifier
SL12G014570
Transcript Identifier
SL12G014570.1
Gene Type
Coding gene
Location
ch12 : 5569788-5576277 : positive

Family

Gene family
HOM03M000802
(87 genes in 14 species)
specific family
Subfamily
ORTHO03M002710
(6 genes in 5 species)
specific family

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Descriptions

Description
Glycerophosphoryl diester phosphodiesterase family protein (AHRD V1 ***- D7MKI0_ARALY)%3B contains Interpro domain(s) IPR017946 PLC-like phosphodiesterase%2C TIM beta/alpha-barrel domain
Description (AnnoMine)
Probable glycerophosphoryl diester phosphodiesterase 3

Identifiers

Identifier Name
pidSolyc12g014570.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006629IEAInterProlipid metabolic process
GO:0006071IEAInterProglycerol metabolic process
GO:0030643ISOPLAZA Integrative Orthologycellular phosphate ion homeostasisAT1G66970
GO:0006952ISOPLAZA Integrative Orthologydefense responseAT1G66980
GO:0009932ISOPLAZA Integrative Orthologycell tip growthAT4G26690
GO:0010053ISOPLAZA Integrative Orthologyroot epidermal cell differentiationAT4G26690
GO:0048765ISOPLAZA Integrative Orthologyroot hair cell differentiationAT4G26690
GO:0010026ISOPLAZA Integrative Orthologytrichome differentiationAT4G26690 AT5G55480
GO:0010442ISOPLAZA Integrative Orthologyguard cell morphogenesisAT4G26690 AT5G55480
GO:0052541ISOPLAZA Integrative Orthologyplant-type cell wall cellulose metabolic processAT4G26690 AT5G55480

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008081IEAInterProphosphoric diester hydrolase activity
GO:0008889IEAInterProglycerophosphodiester phosphodiesterase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0031225ISOPLAZA Integrative Orthologyanchored to membraneAT1G66970 AT3G20520 AT4G26690 AT5G55480 AT5G58170
GO:0046658ISOPLAZA Integrative Orthologyanchored to plasma membraneAT1G66970 AT4G26690 AT5G55480
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT1G66970
GO:0048046ISOPLAZA Integrative OrthologyapoplastAT1G66970 AT5G58170
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT1G66970 AT4G26690 AT5G55480
GO:0009505ISOPLAZA Integrative Orthologyplant-type cell wallAT4G26690
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT5G55480

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004129Glycerophosphoryl diester phosphodiesterase
IPR017946PLC-like phosphodiesterase, TIM beta/alpha-barrel domain

Mapman id Description
11.9.3.3lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network