Gene: SL12G005400 (Solanum lycopersicum)

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Gene Identifier
SL12G005400
Transcript Identifier
SL12G005400.1
Gene Type
Coding gene
Location
ch12 : 236128-242060 : negative

Family

Gene family
HOM03M000201
(251 genes in 14 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Cyclic nucleotide gated channel (AHRD V1 ***- A9CRE4_MALDO)%3B contains Interpro domain(s) IPR000595 Cyclic nucleotide-binding
Description (AnnoMine)
Putative cyclic nucleotide-gated ion channel

Identifiers

Identifier Name
pidSolyc12g005400.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009626ISOPLAZA Integrative Orthologyplant-type hypersensitive responseAT5G54250
GO:0055085IEAPLAZA Homologytransmembrane transportHOM03M000201
GO:0006811IEAPLAZA Homologyion transportHOM03M000201

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008324ISOPLAZA Integrative Orthologycation transmembrane transporter activityAT5G54250
GO:0005516ISOPLAZA Integrative Orthologycalmodulin bindingAT5G54250
GO:0022838IEAPLAZA Homologysubstrate-specific channel activityHOM03M000201
GO:0022803IEAPLAZA Homologypassive transmembrane transporter activityHOM03M000201
GO:0005216IEAPLAZA Homologyion channel activityHOM03M000201
GO:0015267IEAPLAZA Homologychannel activityHOM03M000201

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020ISOPLAZA Integrative OrthologymembraneAT5G54250

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000595Cyclic nucleotide-binding domain
IPR018490Cyclic nucleotide-binding-like
IPR014710RmlC-like jelly roll fold

Mapman id Description
34.22transport.cyclic nucleotide or calcium regulated channels
No SignalP domains detected for this gene.