Gene: SL11G030600 (Solanum lycopersicum)

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Gene Identifier
SL11G030600
Transcript Identifier
SL11G030600.1
Gene Type
Coding gene
Location
ch11 : 18811683-18827974 : negative

Family

Gene family
HOM03M002194
(38 genes in 15 species)
specific family

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Descriptions

Description
DNA (Cytosine-5)-methyltransferase (AHRD V1 **** O49889_SOLLC)%3B contains Interpro domain(s) IPR017198 DNA (cytosine-5)-methyltransferase 1
Description (AnnoMine)
methyltransferase 1

Identifiers

Identifier Name
pidSolyc11g030600.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006306IEAInterProDNA methylation
GO:0009793ISOPLAZA Integrative Orthologyembryo development ending in seed dormancyAT4G13610
GO:0009294ISOPLAZA Integrative OrthologyDNA mediated transformationAT4G14140 AT5G49160
GO:0010069ISOPLAZA Integrative Orthologyzygote asymmetric cytokinesis in embryo sacAT5G49160
GO:0006349ISOPLAZA Integrative Orthologyregulation of gene expression by genetic imprintingAT5G49160
GO:0010216ISOPLAZA Integrative Orthologymaintenance of DNA methylationAT5G49160
GO:0010424ISOPLAZA Integrative OrthologyDNA methylation on cytosine within a CG sequenceAT5G49160
GO:0009910ISOPLAZA Integrative Orthologynegative regulation of flower developmentAT5G49160
GO:0006305IEAPLAZA HomologyDNA alkylationHOM03M002194

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008168IEAInterPromethyltransferase activity
GO:0003677IEAInterProDNA binding
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G49160

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001025Bromo adjacent homology (BAH) domain
IPR001525C-5 cytosine methyltransferase
IPR022702DNA (cytosine-5)-methyltransferase 1, replication foci domain
IPR018117DNA methylase, C-5 cytosine-specific, active site

Mapman id Description
27.3.46RNA.regulation of transcription.DNA methyltransferases
No SignalP domains detected for this gene.