Gene: SL11G010570 (Solanum lycopersicum)

Overview top

Gene Identifier
SL11G010570
Transcript Identifier
SL11G010570.1
Gene Type
Coding gene
Location
ch11 : 3640857-3645766 : positive

Family

Gene family
HOM03M000042
(909 genes in 16 species)
specific family
Subfamily
ORTHO03M002007
(9 genes in 7 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
MADS box transcription factor (AHRD V1 **-- Q2NNB9_ELAGV)%3B contains Interpro domain(s) IPR002100 Transcription factor%2C MADS-box IPR002487 Transcription factor%2C K-box
Description
MADS-box protein JOINTLESS
Description (AnnoMine)
MADS-box protein JOINTLESS

Identifiers

Identifier Name
pidSolyc11g010570.1.1
uniprotQ9FUY6

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0052543IEAUniProtcallose deposition in cell wall1
GO:0010582IEAUniProtfloral meristem determinacy1
GO:0009867IEAUniProtjasmonic acid mediated signaling pathway1
GO:0009965IEAUniProtleaf morphogenesis1
GO:0010076IEAUniProtmaintenance of floral meristem identity1
GO:0000165IEAUniProtMAPK cascade1
GO:0009556IEAUniProtmicrosporogenesis1
GO:0031348IEAUniProtnegative regulation of defense response1
GO:0009910IEAUniProtnegative regulation of flower development1
GO:0045892IEAUniProtnegative regulation of transcription, DNA-dependent1
GO:0048481IEAUniProtovule development1
GO:0045893IEAUniProtpositive regulation of transcription, DNA-dependent1
GO:0006612IEAUniProtprotein targeting to membrane1
GO:0010310IEAUniProtregulation of hydrogen peroxide metabolic process1
GO:0010363IEAUniProtregulation of plant-type hypersensitive response1
GO:0035304IEAUniProtregulation of protein dephosphorylation1
GO:0009617IEAUniProtresponse to bacterium1
GO:0009266IEAUniProtresponse to temperature stimulus1
GO:0009862IEAUniProtsystemic acquired resistance, salicylic acid mediated signaling pathway1
GO:0006351IEAUniProttranscription, DNA-templated1
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0009742ISOPLAZA Integrative Orthologybrassinosteroid mediated signaling pathwayOS03G08754
GO:0009739ISOPLAZA Integrative Orthologyresponse to gibberellin stimulusAT4G24540
GO:0048438ISOPLAZA Integrative Orthologyfloral whorl developmentAT4G24540
GO:0010077ISOPLAZA Integrative Orthologymaintenance of inflorescence meristem identityAT4G24540
GO:0000060ISOPLAZA Integrative Orthologyprotein import into nucleus, translocationAT4G24540
GO:0048510ISOPLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phaseAT4G24540
GO:0010220ISOPLAZA Integrative Orthologypositive regulation of vernalization responseAT4G24540
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03M000042
GO:0010467IEAPLAZA Homologygene expressionHOM03M000042
GO:0006807IEAPLAZA Homologynitrogen compound metabolic processHOM03M000042
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03M000042
GO:0051171IEAPLAZA Homologyregulation of nitrogen compound metabolic processHOM03M000042
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03M000042
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03M000042
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03M000042
GO:0034641IEAPLAZA Homologycellular nitrogen compound metabolic processHOM03M000042
GO:0034645IEAPLAZA Homologycellular macromolecule biosynthetic processHOM03M000042
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03M000042
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03M000042
GO:0018130IEAPLAZA Homologyheterocycle biosynthetic processHOM03M000042
GO:0019438IEAPLAZA Homologyaromatic compound biosynthetic processHOM03M000042
GO:0046483IEAPLAZA Homologyheterocycle metabolic processHOM03M000042
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03M000042
GO:0044271IEAPLAZA Homologycellular nitrogen compound biosynthetic processHOM03M000042
GO:0065007IEAPLAZA Homologybiological regulationHOM03M000042
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03M000042
GO:0006139IEAPLAZA Homologynucleobase-containing compound metabolic processHOM03M000042
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03M000042
GO:0006725IEAPLAZA Homologycellular aromatic compound metabolic processHOM03M000042
GO:1901576IEAPLAZA Homologyorganic substance biosynthetic processHOM03M000042
GO:0090304IEAPLAZA Homologynucleic acid metabolic processHOM03M000042
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03M000042
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000042
GO:0009058IEAPLAZA Homologybiosynthetic processHOM03M000042
GO:0009059IEAPLAZA Homologymacromolecule biosynthetic processHOM03M000042
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03M000042
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03M000042
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03M000042
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03M000042
GO:1901360IEAPLAZA Homologyorganic cyclic compound metabolic processHOM03M000042
GO:1901362IEAPLAZA Homologyorganic cyclic compound biosynthetic processHOM03M000042
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03M000042
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03M000042
GO:0044249IEAPLAZA Homologycellular biosynthetic processHOM03M000042

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAUniProtDNA binding1
GO:0003700IEAUniProtsequence-specific DNA binding transcription factor activity1
GO:0000900IEAUniProttranslation repressor activity, nucleic acid binding1
GO:0046983IEAInterProprotein dimerization activity
GO:0043565ISOPLAZA Integrative Orthologysequence-specific DNA bindingAT4G24540
GO:0046982ISOPLAZA Integrative Orthologyprotein heterodimerization activityAT4G24540
GO:0042803ISOPLAZA Integrative Orthologyprotein homodimerization activityAT4G24540
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT4G24540
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03M000042
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03M000042
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03M000042
GO:0001071IEAPLAZA Homologynucleic acid binding transcription factor activityHOM03M000042

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAUniProtnucleus1
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT4G24540
GO:0043231IEAPLAZA Homologyintracellular membrane-bounded organelleHOM03M000042
GO:0005622IEAPLAZA HomologyintracellularHOM03M000042
GO:0043226IEAPLAZA HomologyorganelleHOM03M000042
GO:0043227IEAPLAZA Homologymembrane-bounded organelleHOM03M000042
GO:0043229IEAPLAZA Homologyintracellular organelleHOM03M000042
GO:0044464IEAPLAZA Homologycell partHOM03M000042
GO:0044424IEAPLAZA Homologyintracellular partHOM03M000042
GO:0005623IEAPLAZA HomologycellHOM03M000042

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002100Transcription factor, MADS-box
IPR002487Transcription factor, K-box

Mapman id Description
27.3.24RNA.regulation of transcription.MADS box transcription factor family
No SignalP domains detected for this gene.
DatabaseType
PlantTFDBMIKC