Gene: SL11G010110 (Solanum lycopersicum)

Overview top

Gene Identifier
SL11G010110
Transcript Identifier
SL11G010110.1
Gene Type
Coding gene
Location
ch11 : 3225347-3233598 : negative

Family

Gene family
HOM03M002426
(35 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Ribosomal RNA small subunit methyltransferase F (AHRD V1 *-*- RSMF_SHESH)%3B contains Interpro domain(s) IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p
Description (AnnoMine)
Multisite-specific tRNA:(cytosine-C(5))-methyltransferase trm4a

Identifiers

Identifier Name
pidSolyc11g010110.1.1

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Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016428IEAInterProtRNA (cytosine-5-)-methyltransferase activity
GO:0003723IEAInterProRNA binding
GO:0008168IEAInterPromethyltransferase activity

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR023270tRNA (C5-cytosine) methyltransferase, NCL1
IPR023267RNA (C5-cytosine) methyltransferase
IPR018314Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site
IPR001678Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p

Mapman id Description
35.2not assigned.unknown
No SignalP domains detected for this gene.