Gene: SL11G008150 (Solanum lycopersicum)

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Gene Identifier
SL11G008150
Transcript Identifier
SL11G008150.1
Gene Type
Coding gene
Location
ch11 : 2415664-2426131 : negative

Family

Gene family
HOM03M001537
(50 genes in 16 species)
specific family

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Descriptions

Description
Transcription elongation factor spt5 (AHRD V1 *-*- B6JZQ2_SCHJY)%3B contains Interpro domain(s) IPR005100 Supt5 repeat
Description (AnnoMine)
Putative transcription elongation factor SPT5 homolog 1

Identifiers

Identifier Name
pidSolyc11g008150.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0006306ISOPLAZA Integrative OrthologyDNA methylationAT5G04290
GO:0030422ISOPLAZA Integrative Orthologyproduction of siRNA involved in RNA interferenceAT5G04290
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03M001537
GO:0006412IEAPLAZA HomologytranslationHOM03M001537
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M001537

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003735IEAPLAZA Homologystructural constituent of ribosomeHOM03M001537

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005840IEAPLAZA HomologyribosomeHOM03M001537

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005824KOW
IPR006645Transcription antitermination protein NusG, N-terminal domain
IPR005100Transcription elongation factor Spt5, NGN domain

Mapman id Description
27.3.67RNA.regulation of transcription.putative transcription regulator
No SignalP domains detected for this gene.