Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchGene: SL10G055490 (Solanum lycopersicum)
Overview 
- Gene Identifier
- SL10G055490
- Transcript Identifier
- SL10G055490.1
- Gene Type
- Coding gene
- Location
- ch10 : 52348436-52348795 : negative
Family
- Gene family
Descriptions
- Description
-
Gag-Pol polyprotein (AHRD V1 ***- B8YLY6_MEDTR)
- Description (AnnoMine)
-
Retrovirus-related Pol polyprotein from transposon TNT 1-94
Identifiers
| Identifier | Name |
|---|---|
| pid | Solyc10g055490.1.1 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0015074 | IEA | PLAZA Homology | DNA integration | HOM03M000006 |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0003676 | IEA | PLAZA Homology | nucleic acid binding | HOM03M000006 |
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
No InterPro domains detected for this gene.
| Mapman id | Description |
|---|---|
| 30.2.17 | signalling.receptor kinases.DUF 26 |
No SignalP domains detected for this gene.