Gene: SL09G009940 (Solanum lycopersicum)

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Gene Identifier
SL09G009940
Transcript Identifier
SL09G009940.1
Gene Type
Coding gene
Location
ch09 : 3402073-3408872 : negative

Family

Gene family
HOM03M000871
(81 genes in 16 species)
specific family

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Descriptions

Description
Signal recognition particle protein (AHRD V1 ***- B0CBK0_ACAM1)%3B contains Interpro domain(s) IPR004780 Signal recognition particle%2C SRP
Description (AnnoMine)
Signal recognition particle 54 kDa protein

Identifiers

Identifier Name
pidSolyc09g009940.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006614IEAInterProSRP-dependent cotranslational protein targeting to membrane
GO:0045038ISOPLAZA Integrative Orthologyprotein import into chloroplast thylakoid membraneAT5G03940
GO:0006613IEAPLAZA Homologycotranslational protein targeting to membraneHOM03M000871

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0017111IEAInterPronucleoside-triphosphatase activity
GO:0000166IEAInterPronucleotide binding
GO:0008312IEAInterPro7S RNA binding
GO:0003924IEAInterProGTPase activity
GO:0005525IEAInterProGTP binding
GO:0005048ISOPLAZA Integrative Orthologysignal sequence bindingAT5G03940
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G03940

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0048500IEAInterProsignal recognition particle
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT5G03940
GO:0080085ISOPLAZA Integrative Orthologysignal recognition particle, chloroplast targetingAT5G03940
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT5G03940

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000897Signal recognition particle, SRP54 subunit, GTPase domain
IPR004125Signal recognition particle, SRP54 subunit, M-domain
IPR022941Signal recognition particle, SRP54 subunit
IPR003593AAA+ ATPase domain
IPR004780Signal recognition particle protein Ffh
IPR013822Signal recognition particle, SRP54 subunit, helical bundle
IPR027417P-loop containing nucleoside triphosphate hydrolase

Mapman id Description
29.3.3protein.targeting.chloroplast
No SignalP domains detected for this gene.