Gene: SL06G070980 (Solanum lycopersicum)

Overview top

Gene Identifier
SL06G070980
Transcript Identifier
SL06G070980.1
Gene Type
Coding gene
Location
ch06 : 39977443-39980570 : negative

Family

Gene family
HOM03M000077
(598 genes in 16 species)
specific family
Subfamily
ORTHO03M000526
(14 genes in 11 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description
Ubiquitin-conjugating enzyme E2 2 (AHRD V1 **** UBC2_MEDSA)%3B contains Interpro domain(s) IPR019775 WD40 repeat%2C conserved site IPR000608 Ubiquitin-conjugating enzyme%2C E2
Description (AnnoMine)
enzyme E2 2

Identifiers

Identifier Name
pidSolyc06g070980.2.1

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006511ISOPLAZA Integrative Orthologyubiquitin-dependent protein catabolic processAT1G14400 AT2G02760 AT5G62540
GO:0009910ISOPLAZA Integrative Orthologynegative regulation of flower developmentAT1G14400
GO:0009965ISOPLAZA Integrative Orthologyleaf morphogenesisAT1G14400
GO:0010228ISOPLAZA Integrative Orthologyvegetative to reproductive phase transition of meristemAT1G14400 AT2G02760
GO:0033523ISOPLAZA Integrative Orthologyhistone H2B ubiquitinationAT1G14400 AT2G02760
GO:0009650ISOPLAZA Integrative OrthologyUV protectionAT2G02760

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016881IEAInterProacid-amino acid ligase activity
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT1G14400 AT2G02760 AT5G62540
GO:0016874IEAPLAZA Homologyligase activityHOM03M000077
GO:0016879IEAPLAZA Homologyligase activity, forming carbon-nitrogen bondsHOM03M000077
GO:0003824IEAPLAZA Homologycatalytic activityHOM03M000077

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829ISOPLAZA Integrative OrthologycytosolAT2G02760

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR016135Ubiquitin-conjugating enzyme/RWD-like
IPR000608Ubiquitin-conjugating enzyme, E2
IPR023313Ubiquitin-conjugating enzyme, active site

Mapman id Description
29.5.11.3protein.degradation.ubiquitin.E2
No SignalP domains detected for this gene.