Gene: SL06G062800 (Solanum lycopersicum)

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Gene Identifier
SL06G062800
Transcript Identifier
SL06G062800.1
Gene Type
Coding gene
Location
ch06 : 36013297-36015435 : negative

Family

Gene family
HOM03M000037
(943 genes in 16 species)
specific family
Subfamily
ORTHO03M019715
(2 genes in 2 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
ATP-dependent RNA helicase eIF4A (AHRD V1 ***- A8PG49_COPC7)%3B contains Interpro domain(s) IPR011545 DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal
Description (AnnoMine)
Eukaryotic initiation factor 4A

Identifiers

Identifier Name
pidSolyc06g062800.2.1

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Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008026IEAInterProATP-dependent helicase activity
GO:0004386IEAInterProhelicase activity
GO:0003676IEAInterPronucleic acid binding
GO:0005524IEAInterProATP binding
GO:0032555IEAPLAZA Homologypurine ribonucleotide bindingHOM03M000037
GO:0016817IEAPLAZA Homologyhydrolase activity, acting on acid anhydridesHOM03M000037
GO:0043168IEAPLAZA Homologyanion bindingHOM03M000037
GO:0042623IEAPLAZA HomologyATPase activity, coupledHOM03M000037
GO:0032553IEAPLAZA Homologyribonucleotide bindingHOM03M000037
GO:0043167IEAPLAZA Homologyion bindingHOM03M000037
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03M000037
GO:0097367IEAPLAZA Homologycarbohydrate derivative bindingHOM03M000037
GO:0003824IEAPLAZA Homologycatalytic activityHOM03M000037
GO:0016818IEAPLAZA Homologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesHOM03M000037
GO:0032559IEAPLAZA Homologyadenyl ribonucleotide bindingHOM03M000037
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03M000037
GO:0016462IEAPLAZA Homologypyrophosphatase activityHOM03M000037
GO:0000166IEAPLAZA Homologynucleotide bindingHOM03M000037
GO:0030554IEAPLAZA Homologyadenyl nucleotide bindingHOM03M000037
GO:0001882IEAPLAZA Homologynucleoside bindingHOM03M000037
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03M000037
GO:0017076IEAPLAZA Homologypurine nucleotide bindingHOM03M000037
GO:0016887IEAPLAZA HomologyATPase activityHOM03M000037
GO:0017111IEAPLAZA Homologynucleoside-triphosphatase activityHOM03M000037
GO:0036094IEAPLAZA Homologysmall molecule bindingHOM03M000037
GO:0032549IEAPLAZA Homologyribonucleoside bindingHOM03M000037
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03M000037
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03M000037
GO:0005488IEAPLAZA HomologybindingHOM03M000037
GO:0001883IEAPLAZA Homologypurine nucleoside bindingHOM03M000037
GO:0032550IEAPLAZA Homologypurine ribonucleoside bindingHOM03M000037
GO:0070035IEAPLAZA Homologypurine NTP-dependent helicase activityHOM03M000037

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR014014RNA helicase, DEAD-box type, Q motif
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR014001Helicase, superfamily 1/2, ATP-binding domain
IPR001650Helicase, C-terminal
IPR011545DNA/RNA helicase, DEAD/DEAH box type, N-terminal
IPR000629RNA helicase, ATP-dependent, DEAD-box, conserved site

Mapman id Description
27.1.2RNA.processing.RNA helicase
28.1DNA.synthesis/chromatin structure
No SignalP domains detected for this gene.