Gene: SL06G008030 (Solanum lycopersicum)

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Gene Identifier
SL06G008030
Transcript Identifier
SL06G008030.1
Gene Type
Coding gene
Location
ch06 : 1865425-1869843 : negative

Family

Gene family
HOM03M000047
(829 genes in 14 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
BHLH transcription factor (AHRD V1 *-** B6TXR4_MAIZE)%3B contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Description (AnnoMine)
Transcription factor PIF1

Identifiers

Identifier Name
pidSolyc06g008030.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0015995ISOPLAZA Integrative Orthologychlorophyll biosynthetic processAT2G20180
GO:0010187ISOPLAZA Integrative Orthologynegative regulation of seed germinationAT2G20180
GO:0009959ISOPLAZA Integrative Orthologynegative gravitropismAT2G20180
GO:0010029ISOPLAZA Integrative Orthologyregulation of seed germinationAT2G20180
GO:0010099ISOPLAZA Integrative Orthologyregulation of photomorphogenesisAT2G20180
GO:0006355ISOPLAZA Integrative Orthologyregulation of transcription, DNA-dependentAT2G20180
GO:0009740ISOPLAZA Integrative Orthologygibberellic acid mediated signaling pathwayAT2G20180
GO:0010100ISOPLAZA Integrative Orthologynegative regulation of photomorphogenesisAT2G20180
GO:0010161ISOPLAZA Integrative Orthologyred light signaling pathwayAT2G20180
GO:0006783ISOPLAZA Integrative Orthologyheme biosynthetic processAT2G20180

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046983IEAInterProprotein dimerization activity
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT2G20180
GO:0010313ISOPLAZA Integrative Orthologyphytochrome bindingAT2G20180
GO:0003700ISOPLAZA Integrative Orthologysequence-specific DNA binding transcription factor activityAT2G20180
GO:0003677ISOPLAZA Integrative OrthologyDNA bindingAT2G20180
GO:0042802ISOPLAZA Integrative Orthologyidentical protein bindingAT2G20180

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT2G20180

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain

Mapman id Description
27.3.6RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
No SignalP domains detected for this gene.
DatabaseType
PlantTFDBbHLH