Gene: SL05G054950 (Solanum lycopersicum)

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Gene Identifier
SL05G054950
Transcript Identifier
SL05G054950.1
Gene Type
Coding gene
Location
ch05 : 63884729-63891255 : positive

Family

Gene family
HOM03M005717
(18 genes in 16 species)
specific family

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Descriptions

Description
Peroxisome assembly protein 12 (AHRD V1 ***- C0HB20_SALSA)%3B contains Interpro domain(s) IPR017375 Peroxisome assembly%2C p12
Description (AnnoMine)
Peroxisome biogenesis protein 12

Identifiers

Identifier Name
pidSolyc05g054950.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006625IEAInterProprotein targeting to peroxisome
GO:0006513ISOPLAZA Integrative Orthologyprotein monoubiquitinationAT3G04460
GO:0006635ISOPLAZA Integrative Orthologyfatty acid beta-oxidationAT3G04460
GO:0016558ISOPLAZA Integrative Orthologyprotein import into peroxisome matrixAT3G04460
GO:0048598ISOPLAZA Integrative Orthologyembryonic morphogenesisAT3G04460
GO:0007031ISOPLAZA Integrative Orthologyperoxisome organizationAT3G04460
GO:0072663IEAPLAZA Homologyestablishment of protein localization to peroxisomeHOM03M005717
GO:0072662IEAPLAZA Homologyprotein localization to peroxisomeHOM03M005717

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270IEAInterProzinc ion binding
GO:0008022IEAInterProprotein C-terminus binding
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT3G04460

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005779IEAInterProintegral to peroxisomal membrane
GO:0005778ISOPLAZA Integrative Orthologyperoxisomal membraneAT3G04460
GO:0005777ISOPLAZA Integrative OrthologyperoxisomeAT3G04460
GO:0031231IEAPLAZA Homologyintrinsic to peroxisomal membraneHOM03M005717

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR006845Pex, N-terminal
IPR017375Peroxisome assembly protein 12

Mapman id Description
35.2not assigned.unknown
No SignalP domains detected for this gene.