Gene: SL05G025590 (Solanum lycopersicum)

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Gene Identifier
SL05G025590
Transcript Identifier
SL05G025590.1
Gene Type
Coding gene
Location
ch05 : 34409148-34411996 : positive

Family

Gene family
HOM03M000839
(83 genes in 16 species)
specific family
Subfamily
ORTHO03M001367
(10 genes in 8 species)
specific family

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Descriptions

Description
Single-stranded DNA-binding replication protein A large subunit (AHRD V1 **** D2V0Z2_NAEGR)%3B contains Interpro domain(s) IPR004591 Replication factor-a protein 1 Rpa1
Description (AnnoMine)
Replication protein A 70 kDa DNA-binding subunit A

Identifiers

Identifier Name
pidSolyc05g025590.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006260IEAInterProDNA replication
GO:0007131ISOPLAZA Integrative Orthologyreciprocal meiotic recombinationAT2G06510
GO:0007141ISOPLAZA Integrative Orthologymale meiosis IAT2G06510
GO:0009555ISOPLAZA Integrative Orthologypollen developmentAT2G06510 OS02G53680
GO:0048232ISOPLAZA Integrative Orthologymale gamete generationAT2G06510
GO:0051026ISOPLAZA Integrative Orthologychiasma assemblyAT2G06510
GO:0006281ISOPLAZA Integrative OrthologyDNA repairOS02G53680
GO:0007140ISOPLAZA Integrative Orthologymale meiosisOS02G53680

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676IEAInterPronucleic acid binding
GO:0003677IEAInterProDNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAInterPronucleus
GO:0000790ISOPLAZA Integrative Orthologynuclear chromatinAT2G06510

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004591Replication factor-a protein 1 Rpa1
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR012340Nucleic acid-binding, OB-fold
IPR007199Replication factor-A protein 1, N-terminal
IPR013955Replication factor A, C-terminal

Mapman id Description
29.5protein.degradation
No SignalP domains detected for this gene.