Gene: SL04G080930 (Solanum lycopersicum)

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Gene Identifier
SL04G080930
Transcript Identifier
SL04G080930.1
Gene Type
Coding gene
Location
ch04 : 62570659-62575404 : negative

Family

Gene family
HOM03M005557
(18 genes in 16 species)
specific family

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Descriptions

Description
Peroxisome biogenesis factor 10 (AHRD V1 **-- B9U2H6_TOBAC)%3B contains Interpro domain(s) IPR006845 Pex%2C N-terminal
Description (AnnoMine)
Peroxisome biogenesis factor 10

Identifiers

Identifier Name
pidSolyc04g080930.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007031IEAInterProperoxisome organization
GO:0016558IEAInterProprotein import into peroxisome matrix
GO:0006513ISOPLAZA Integrative Orthologyprotein monoubiquitinationAT2G26350
GO:0006635ISOPLAZA Integrative Orthologyfatty acid beta-oxidationAT2G26350
GO:0010381ISOPLAZA Integrative Orthologyattachment of peroxisome to chloroplastAT2G26350
GO:0009853ISOPLAZA Integrative OrthologyphotorespirationAT2G26350
GO:0009793ISOPLAZA Integrative Orthologyembryo development ending in seed dormancyAT2G26350

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0008270IEAInterProzinc ion binding
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT2G26350

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005779IEAInterProintegral to peroxisomal membrane
GO:0005829ISOPLAZA Integrative OrthologycytosolAT2G26350
GO:0005783ISOPLAZA Integrative Orthologyendoplasmic reticulumAT2G26350
GO:0005777ISOPLAZA Integrative OrthologyperoxisomeAT2G26350
GO:0031231IEAPLAZA Homologyintrinsic to peroxisomal membraneHOM03M005557
GO:0005778IEAPLAZA Homologyperoxisomal membraneHOM03M005557
GO:0031903IEAPLAZA Homologymicrobody membraneHOM03M005557

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001841Zinc finger, RING-type
IPR025654Peroxisome biogenesis factor 10
IPR006845Pex, N-terminal
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR017907Zinc finger, RING-type, conserved site

Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
No SignalP domains detected for this gene.