Gene: SL04G009310 (Solanum lycopersicum)

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Gene Identifier
SL04G009310
Transcript Identifier
SL04G009310.1
Gene Type
Coding gene
Location
ch04 : 2760772-2765126 : positive

Family

Gene family
HOM03M000233
(222 genes in 16 species)
specific family

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Descriptions

Description
ATP-dependent Clp protease proteolytic subunit (AHRD V1 ***- A5AL82_VITVI)%3B contains Interpro domain(s) IPR001907 Peptidase S14%2C ClpP
Description (AnnoMine)
protease proteolytic subunit

Identifiers

Identifier Name
pidSolyc04g009310.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006508IEAInterProproteolysis

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004252IEAInterProserine-type endopeptidase activity
GO:0050897ISOPLAZA Integrative Orthologycobalt ion bindingAT5G23140
GO:0008270ISOPLAZA Integrative Orthologyzinc ion bindingAT5G23140
GO:0070011IEAPLAZA Homologypeptidase activity, acting on L-amino acid peptidesHOM03M000233
GO:0004175IEAPLAZA Homologyendopeptidase activityHOM03M000233
GO:0008236IEAPLAZA Homologyserine-type peptidase activityHOM03M000233
GO:0008233IEAPLAZA Homologypeptidase activityHOM03M000233
GO:0017171IEAPLAZA Homologyserine hydrolase activityHOM03M000233

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009532ISOPLAZA Integrative Orthologyplastid stromaAT5G23140
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT5G23140
GO:0005759ISOPLAZA Integrative Orthologymitochondrial matrixAT5G23140
GO:0009840ISOPLAZA Integrative Orthologychloroplastic endopeptidase Clp complexAT5G23140
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT5G23140
GO:0009535ISOPLAZA Integrative Orthologychloroplast thylakoid membraneAT5G23140

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR001907ClpP
IPR018215ClpP, active site

Mapman id Description
29.5.5protein.degradation.serine protease
No SignalP domains detected for this gene.