Gene: SL03G117510 (Solanum lycopersicum)

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Gene Identifier
SL03G117510
Transcript Identifier
SL03G117510.1
Gene Type
Coding gene
Location
ch03 : 60702574-60707188 : positive

Family

Gene family
HOM03M003314
(27 genes in 16 species)
specific family

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Descriptions

Description
Formamidopyrimidine-DNA glycosylase (AHRD V1 **** C5JTH8_AJEDS)%3B contains Interpro domain(s) IPR000191 DNA glycosylase/AP lyase
Description (AnnoMine)
Formamidopyrimidine-DNA glycosylase

Identifiers

Identifier Name
pidSolyc03g117510.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006281IEAInterProDNA repair
GO:0006284IEAInterProbase-excision repair
GO:0006289IEAInterPronucleotide-excision repair
GO:0006979ISOPLAZA Integrative Orthologyresponse to oxidative stressAT1G52500

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003906IEAInterProDNA-(apurinic or apyrimidinic site) lyase activity
GO:0003684IEAInterProdamaged DNA binding
GO:0008534IEAInterProoxidized purine nucleobase lesion DNA N-glycosylase activity
GO:0008270IEAInterProzinc ion binding
GO:0003676IEAInterPronucleic acid binding
GO:0016799IEAInterProhydrolase activity, hydrolyzing N-glycosyl compounds
GO:0019104ISOPLAZA Integrative OrthologyDNA N-glycosylase activityAT1G52500
GO:0000702IEAPLAZA Homologyoxidized base lesion DNA N-glycosylase activityHOM03M003314

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR012319DNA glycosylase/AP lyase, catalytic domain
IPR000191DNA glycosylase/AP lyase
IPR015886DNA glycosylase/AP lyase, H2TH DNA-binding
IPR010979Ribosomal protein S13-like, H2TH

Mapman id Description
28.2DNA.repair
No SignalP domains detected for this gene.