Gene: SL03G117360 (Solanum lycopersicum)

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Gene Identifier
SL03G117360
Transcript Identifier
SL03G117360.1
Gene Type
Coding gene
Location
ch03 : 60573693-60583645 : positive

Family

Gene family
HOM03M000684
(100 genes in 14 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description
WD-40 repeat protein-like (Fragment) (AHRD V1 *--- Q1HIU4_9ROSI)%3B contains Interpro domain(s) IPR017986 WD40 repeat%2C region
Description (AnnoMine)
Topless-related protein 4

Identifiers

Identifier Name
pidSolyc03g117360.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0010072ISOPLAZA Integrative Orthologyprimary shoot apical meristem specificationAT1G80490 AT1G15750
GO:0009867ISOPLAZA Integrative Orthologyjasmonic acid mediated signaling pathwayAT1G15750
GO:0045892ISOPLAZA Integrative Orthologynegative regulation of transcription, DNA-dependentAT1G15750
GO:0010051ISOPLAZA Integrative Orthologyxylem and phloem pattern formationAT1G15750
GO:0009733ISOPLAZA Integrative Orthologyresponse to auxinAT1G15750
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000684

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0042803ISOPLAZA Integrative Orthologyprotein homodimerization activityAT1G15750

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829ISOPLAZA Integrative OrthologycytosolAT1G80490 AT1G15750
GO:0005634ISOPLAZA Integrative OrthologynucleusAT1G15750

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR027728Topless family
IPR001680WD40 repeat
IPR017986WD40-repeat-containing domain
IPR006594LisH dimerisation motif
IPR006595CTLH, C-terminal LisH motif
IPR019775WD40 repeat, conserved site
IPR015943WD40/YVTN repeat-like-containing domain

Mapman id Description
33.99development.unspecified
No SignalP domains detected for this gene.