Gene: SL03G095720 (Solanum lycopersicum)

Overview top

Gene Identifier
SL03G095720
Transcript Identifier
SL03G095720.1
Gene Type
Coding gene
Location
ch03 : 50344680-50348524 : negative

Family

Gene family
HOM03M002709
(32 genes in 16 species)
specific family
Subfamily
ORTHO03M004457
(7 genes in 6 species)
specific family

Loading...please wait

Descriptions

Description
Transcription elongation factor A protein 2 (AHRD V1 **** B6TCL2_MAIZE)%3B contains Interpro domain(s) IPR006289 Transcription elongation factor%2C TFIIS
Description (AnnoMine)
Transcription elongation factor A protein 1

Identifiers

Identifier Name
pidSolyc03g095720.2.1

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0006351IEAInterProtranscription, DNA-templated
GO:0009845ISOPLAZA Integrative Orthologyseed germinationAT2G38560
GO:0009739ISOPLAZA Integrative Orthologyresponse to gibberellin stimulusAT2G38560
GO:0034243ISOPLAZA Integrative Orthologyregulation of transcription elongation from RNA polymerase II promoterAT2G38560
GO:0010162ISOPLAZA Integrative Orthologyseed dormancy processAT2G38560
GO:0009910ISOPLAZA Integrative Orthologynegative regulation of flower developmentAT2G38560
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M002709

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270IEAInterProzinc ion binding
GO:0003676IEAInterPronucleic acid binding
GO:0003677IEAInterProDNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAInterPronucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR017923Transcription factor IIS, N-terminal
IPR017890Transcription elongation factor S-IIM
IPR001222Zinc finger, TFIIS-type
IPR003618Transcription elongation factor S-II, central domain
IPR006289Transcription elongation factor, TFIIS
IPR003617Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type

Mapman id Description
29.2.4protein.synthesis.elongation
No SignalP domains detected for this gene.