Gene: SL03G063220 (Solanum lycopersicum)

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Gene Identifier
SL03G063220
Transcript Identifier
SL03G063220.1
Gene Type
Coding gene
Location
ch03 : 31045758-31063672 : negative

Family

Gene family
HOM03M000104
(463 genes in 16 species)
specific family

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Descriptions

Description
Helicase SWR1 (AHRD V1 *--- A5DYP3_LODEL)%3B contains Interpro domain(s) IPR000330 SNF2-related
Description (AnnoMine)
PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1

Identifiers

Identifier Name
pidSolyc03g063220.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009910ISOPLAZA Integrative Orthologynegative regulation of flower developmentAT3G12810
GO:0048441ISOPLAZA Integrative Orthologypetal developmentAT3G12810
GO:0048451ISOPLAZA Integrative Orthologypetal formationAT3G12810
GO:0042742ISOPLAZA Integrative Orthologydefense response to bacteriumAT3G12810
GO:0046686ISOPLAZA Integrative Orthologyresponse to cadmium ionAT3G12810

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004386IEAInterProhelicase activity
GO:0003676IEAInterPronucleic acid binding
GO:0003677IEAInterProDNA binding
GO:0005524IEAInterProATP binding
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT3G12810
GO:0032555IEAPLAZA Homologypurine ribonucleotide bindingHOM03M000104
GO:0016817IEAPLAZA Homologyhydrolase activity, acting on acid anhydridesHOM03M000104
GO:0032553IEAPLAZA Homologyribonucleotide bindingHOM03M000104
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03M000104
GO:0097367IEAPLAZA Homologycarbohydrate derivative bindingHOM03M000104
GO:0016818IEAPLAZA Homologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesHOM03M000104
GO:0032559IEAPLAZA Homologyadenyl ribonucleotide bindingHOM03M000104
GO:0016462IEAPLAZA Homologypyrophosphatase activityHOM03M000104
GO:0030554IEAPLAZA Homologyadenyl nucleotide bindingHOM03M000104
GO:0001882IEAPLAZA Homologynucleoside bindingHOM03M000104
GO:0017076IEAPLAZA Homologypurine nucleotide bindingHOM03M000104
GO:0017111IEAPLAZA Homologynucleoside-triphosphatase activityHOM03M000104
GO:0032549IEAPLAZA Homologyribonucleoside bindingHOM03M000104
GO:0001883IEAPLAZA Homologypurine nucleoside bindingHOM03M000104
GO:0032550IEAPLAZA Homologypurine ribonucleoside bindingHOM03M000104

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005618ISOPLAZA Integrative Orthologycell wallAT3G12810

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000330SNF2-related
IPR014001Helicase, superfamily 1/2, ATP-binding domain
IPR014012Helicase/SANT-associated, DNA binding
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR013999HAS subgroup
IPR001650Helicase, C-terminal

Mapman id Description
27.3.44RNA.regulation of transcription.Chromatin Remodeling Factors
No SignalP domains detected for this gene.