Gene: SL02G088560 (Solanum lycopersicum)

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Gene Identifier
SL02G088560
Transcript Identifier
SL02G088560.1
Gene Type
Coding gene
Location
ch02 : 45186403-45189865 : negative

Family

Gene family
HOM03M000201
(251 genes in 14 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Cyclic nucleotide gated channel (AHRD V1 **** A9CRE4_MALDO)%3B contains Interpro domain(s) IPR000595 Cyclic nucleotide-binding
Description (AnnoMine)
Putative cyclic nucleotide-gated ion channel

Identifiers

Identifier Name
pidSolyc02g088560.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006952ISOPLAZA Integrative Orthologydefense responseAT5G15410
GO:0009626ISOPLAZA Integrative Orthologyplant-type hypersensitive responseAT5G15410
GO:0007263ISOPLAZA Integrative Orthologynitric oxide mediated signal transductionAT5G15410
GO:0055085IEAPLAZA Homologytransmembrane transportHOM03M000201
GO:0006811IEAPLAZA Homologyion transportHOM03M000201

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005242ISOPLAZA Integrative Orthologyinward rectifier potassium channel activityAT5G15410
GO:0005221ISOPLAZA Integrative Orthologyintracellular cyclic nucleotide activated cation channel activityAT5G15410
GO:0005516ISOPLAZA Integrative Orthologycalmodulin bindingAT5G15410
GO:0005222ISOPLAZA Integrative Orthologyintracellular cAMP activated cation channel activityAT5G15410
GO:0005262ISOPLAZA Integrative Orthologycalcium channel activityAT5G15410
GO:0022838IEAPLAZA Homologysubstrate-specific channel activityHOM03M000201
GO:0022803IEAPLAZA Homologypassive transmembrane transporter activityHOM03M000201
GO:0005216IEAPLAZA Homologyion channel activityHOM03M000201
GO:0015267IEAPLAZA Homologychannel activityHOM03M000201

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020IEAPLAZA HomologymembraneHOM03M000201

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR014710RmlC-like jelly roll fold
IPR000595Cyclic nucleotide-binding domain
IPR018490Cyclic nucleotide-binding-like

Mapman id Description
34.22transport.cyclic nucleotide or calcium regulated channels
No SignalP domains detected for this gene.