PLAZA 3.0 Monocots gene overview : SL02G078940

Gene: SL02G078940 (Solanum lycopersicum)

Overview

Gene Identifier: SL02G078940
Transcript Identifier: SL02G078940.1
Gene Type: Coding gene
Location: ch02 : 38131391-38135453 : positive

Family

Gene family: HOM03M002908
(30 genes in 14 species)
specific family

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Descriptions

Description: Zinc-binding dehydrogenase superfamily (Quinone oxidoreductase NADPH dependent) (AHRD V1 **-* Q1LPW6_RALME)%3B contains Interpro domain(s) IPR014189 Quinone oxidoreductase putative%2C PIG3

Description (AnnoMine): polyketide synthase type I PpsC

Identifiers

Identifier	Name
pid	Solyc02g078940.2.1

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0055114	IEA	InterPro	oxidation-reduction process

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0016747	IEA	InterPro	transferase activity, transferring acyl groups other than amino-acyl groups
GO:0016491	IEA	InterPro	oxidoreductase activity
GO:0008270	IEA	InterPro	zinc ion binding

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT4G21580

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR016040	NAD(P)-binding domain
IPR013149	Alcohol dehydrogenase, C-terminal
IPR011032	GroES (chaperonin 10)-like
IPR020843	Polyketide synthase, enoylreductase
IPR002085	Alcohol dehydrogenase superfamily, zinc-type
IPR014189	Quinone oxidoreductase PIG3
IPR013154	Alcohol dehydrogenase GroES-like

Mapman id	Description
26.1	misc.misc2
26.7	misc.oxidases - copper, flavone etc

No SignalP domains detected for this gene.