Gene: SL01G111530 (Solanum lycopersicum)
Overview 
- Gene Identifier
- SL01G111530
- Transcript Identifier
- SL01G111530.1
- Gene Type
- Coding gene
- Location
- ch01 : 89516733-89527258 : positive
Family
- Gene family
- Duplication type
- Block duplicate
Descriptions
- Description
-
Ubiquitin-protein ligase 4 (AHRD V1 *-** D7M7X1_ARALY)%3B contains Interpro domain(s) IPR000569 HECT
- Description (AnnoMine)
-
Probable ubiquitin fusion degradation protein C12B10.01c
Identifiers
Identifier | Name |
---|---|
pid | Solyc01g111530.2.1 |
Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0042023 | ISO | PLAZA Integrative Orthology | DNA endoreduplication | AT4G38600 |
GO:0010091 | ISO | PLAZA Integrative Orthology | trichome branching | AT4G38600 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005515 | IEA | InterPro | protein binding | |
GO:0004842 | IEA | InterPro | ubiquitin-protein ligase activity | |
GO:0005488 | IEA | InterPro | binding |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT4G38600 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
29.5.11.4.1 | protein.degradation.ubiquitin.E3.HECT |
No SignalP domains detected for this gene.