Gene: SL01G091800 (Solanum lycopersicum)

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Gene Identifier
SL01G091800
Transcript Identifier
SL01G091800.1
Gene Type
Coding gene
Location
ch01 : 77119727-77125807 : negative

Family

Gene family
HOM03M000987
(72 genes in 16 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description
Ribosomal RNA small subunit methyltransferase A (AHRD V1 ***- D6YS21_WADCW)%3B contains Interpro domain(s) IPR011530 rRNA adenine dimethylase
Description (AnnoMine)
small subunit methyltransferase A

Identifiers

Identifier Name
pidSolyc01g091800.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006364IEAInterProrRNA processing
GO:0000154IEAInterProrRNA modification
GO:0009409ISOPLAZA Integrative Orthologyresponse to coldAT1G01860

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008649IEAInterProrRNA methyltransferase activity
GO:0000179IEAInterProrRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0016433IEAInterProrRNA (adenine) methyltransferase activity
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03M000987
GO:0000166IEAPLAZA Homologynucleotide bindingHOM03M000987
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03M000987

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001737Ribosomal RNA adenine methylase transferase
IPR011530Ribosomal RNA adenine dimethylase
IPR023165rRNA adenine dimethylase-like
IPR020598Ribosomal RNA adenine methylase transferase, N-terminal
IPR020596Ribosomal RNA adenine methylase transferase, conserved site

Mapman id Description
27.1RNA.processing
No SignalP domains detected for this gene.