Gene: SL01G011000 (Solanum lycopersicum)

Overview top

Gene Identifier
SL01G011000
Transcript Identifier
SL01G011000.1
Gene Type
Coding gene
Location
ch01 : 6848323-6851049 : negative

Family

Gene family
HOM03M000940
(74 genes in 16 species)
specific family
Subfamily
ORTHO03M015044
(3 genes in 2 species)
specific family

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Descriptions

Description
Eukaryotic translation initiation factor 5A (AHRD V1 **** D6N3G5_GOSHI)%3B contains Interpro domain(s) IPR001884 Translation elongation factor%2C IF5A
Description
Eukaryotic translation initiation factor 5A-3
Description (AnnoMine)
Eukaryotic translation initiation factor 5A

Identifiers

Identifier Name
pidSolyc01g011000.2.1
uniprotQ9AXQ4

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008612IEAUniProtpeptidyl-lysine modification to hypusine1
GO:0045901IEAUniProtpositive regulation of translational elongation1
GO:0045905IEAUniProtpositive regulation of translational termination1
GO:0006452IEAUniProttranslational frameshifting1
GO:0010089ISOPLAZA Integrative Orthologyxylem developmentAT1G13950
GO:0006449IEAPLAZA Homologyregulation of translational terminationHOM03M000940
GO:0046516IEAPLAZA Homologyhypusine metabolic processHOM03M000940

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0043022IEAUniProtribosome binding1
GO:0003746IEAUniProttranslation elongation factor activity1
GO:0003743IEAUniProttranslation initiation factor activity1
GO:0003723IEAInterProRNA binding

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR012340Nucleic acid-binding, OB-fold
IPR020189Translation elongation factor, IF5A C-terminal
IPR014722Ribosomal protein L2 domain 2
IPR019769Translation elongation factor, IF5A, hypusine site
IPR008991Translation protein SH3-like domain
IPR001884Translation elongation factor IF5A

Mapman id Description
29.2.3protein.synthesis.initiation
No SignalP domains detected for this gene.