Gene: SL01G006030 (Solanum lycopersicum)

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Gene Identifier
SL01G006030
Transcript Identifier
SL01G006030.1
Gene Type
Coding gene
Location
ch01 : 713315-717218 : negative

Family

Gene family
HOM03M002008
(41 genes in 16 species)
specific family
Subfamily
ORTHO03M023878
(2 genes in 2 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description
E3 ubiquitin-protein ligase bre1 (AHRD V1 *-*- B6K254_SCHJY)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type
Description (AnnoMine)
protein ligase BRE1-like 2

Identifiers

Identifier Name
pidSolyc01g006030.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010162ISOPLAZA Integrative Orthologyseed dormancy processAT1G55250
GO:0010390ISOPLAZA Integrative Orthologyhistone monoubiquitinationAT1G55250
GO:0009965ISOPLAZA Integrative Orthologyleaf morphogenesisAT1G55250
GO:0010228ISOPLAZA Integrative Orthologyvegetative to reproductive phase transition of meristemAT1G55250
GO:0033523ISOPLAZA Integrative Orthologyhistone H2B ubiquitinationAT1G55250

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0008270IEAInterProzinc ion binding
GO:0042803ISOPLAZA Integrative Orthologyprotein homodimerization activityAT1G55250

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT1G55250

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR017907Zinc finger, RING-type, conserved site
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type

Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
No SignalP domains detected for this gene.