Gene: SL00G017230 (Solanum lycopersicum)

Overview top

Gene Identifier
SL00G017230
Transcript Identifier
SL00G017230.1
Gene Type
Coding gene
Location
ch00 : 11471562-11473299 : negative

Family

Gene family
HOM03M000050
(752 genes in 15 species)
specific family
Subfamily
ORTHO03M029635
(2 genes in 2 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Expansin (AHRD V1 ***- A4GWU6_LITCN)%3B contains Interpro domain(s) IPR007112 Expansin 45%2C endoglucanase-like IPR007117 Pollen allergen/expansin%2C C-terminal
Description (AnnoMine)
Expansin-A3

Identifiers

Identifier Name
pidSolyc00g017230.1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009664IEAInterProplant-type cell wall organization
GO:0006949ISOPLAZA Integrative Orthologysyncytium formationAT2G37640
GO:0009739ISOPLAZA Integrative Orthologyresponse to gibberellin stimulusAT2G37640
GO:0010114ISOPLAZA Integrative Orthologyresponse to red lightAT2G37640
GO:0071669IEAPLAZA Homologyplant-type cell wall organization or biogenesisHOM03M000050
GO:0071555IEAPLAZA Homologycell wall organizationHOM03M000050
GO:0045229IEAPLAZA Homologyexternal encapsulating structure organizationHOM03M000050
GO:0071554IEAPLAZA Homologycell wall organization or biogenesisHOM03M000050
GO:0071840IEAPLAZA Homologycellular component organization or biogenesisHOM03M000050
GO:0016043IEAPLAZA Homologycellular component organizationHOM03M000050

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576IEAInterProextracellular region
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT5G02260

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR009009RlpA-like double-psi beta-barrel domain
IPR007112Expansin/pollen allergen, DPBB domain
IPR007118Expansin/Lol pI
IPR007117Expansin, cellulose-binding-like domain
IPR002963Expansin
IPR014733Barwin-like endoglucanase

Mapman id Description
10.7cell wall.modification
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network