PLAZA 3.0 Monocots gene overview : SI009G38050

Gene: SI009G38050 (Setaria italica)

Overview

Gene Identifier: SI009G38050
Transcript Identifier: SI009G38050.1
Gene Type: Coding gene
Location: scaffold_9 : 42799905-42800279 : positive

Family

Gene family: HOM03M001494
(51 genes in 14 species)
specific family

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Descriptions

Description (AnnoMine): Protein ELF4-LIKE

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	Si038043m
tid	Si038043m
id	PAC:19682600
GeneName	Si038043m.g

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0009648	ISO	PLAZA Integrative Orthology	photoperiodism	AT1G17455 AT1G72630 AT2G40080
GO:0042753	ISO	PLAZA Integrative Orthology	positive regulation of circadian rhythm	AT2G29950 AT2G40080
GO:0009909	ISO	PLAZA Integrative Orthology	regulation of flower development	AT2G40080
GO:0010114	ISO	PLAZA Integrative Orthology	response to red light	AT2G40080
GO:0010017	ISO	PLAZA Integrative Orthology	red or far-red light signaling pathway	AT2G40080
GO:0009649	ISO	PLAZA Integrative Orthology	entrainment of circadian clock	AT2G40080
GO:0048573	ISO	PLAZA Integrative Orthology	photoperiodism, flowering	AT2G40080
GO:0080167	ISO	PLAZA Integrative Orthology	response to karrikin	AT2G40080
GO:0048511	IEA	PLAZA Homology	rhythmic process	HOM03M001494

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0042803	ISO	PLAZA Integrative Orthology	protein homodimerization activity	AT2G40080

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT2G40080

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR009741	Protein of unknown function DUF1313

Mapman id	Description
35.2	not assigned.unknown

No SignalP domains detected for this gene.