PLAZA 3.0 Monocots gene overview : SI008G09400

Gene: SI008G09400 (Setaria italica)

Overview

Gene Identifier: SI008G09400
Transcript Identifier: SI008G09400.1
Gene Type: Coding gene
Location: scaffold_8 : 12070112-12072678 : positive

Family

Gene family: HOM03M005630
(18 genes in 14 species)
specific family
Subfamily: ORTHO03M008378
(5 genes in 5 species)
specific family

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Descriptions

Description (AnnoMine): I and III subunit RPAC2

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	Si027786m
tid	Si027786m
id	PAC:19706328
GeneName	Si027786m.g

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006351	IEA	Genome Project	transcription, DNA-templated
GO:0009304	ISO	PLAZA Integrative Orthology	tRNA transcription	AT2G29540

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0003899	IEA	Genome Project	DNA-directed RNA polymerase activity
GO:0046983	IEA	Genome Project	protein dimerization activity
GO:0003677	IEA	PLAZA Homology	DNA binding	HOM03M005630

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005666	ISO	PLAZA Integrative Orthology	DNA-directed RNA polymerase III complex	AT2G29540

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR009025	DNA-directed RNA polymerase, RBP11-like dimerisation domain

Mapman id	Description
27.2	RNA.transcription

No SignalP domains detected for this gene.