Gene: SI006G20720 (Setaria italica)

Overview top

Gene Identifier
SI006G20720
Transcript Identifier
SI006G20720.1
Gene Type
Coding gene
Location
scaffold_6 : 32715168-32718855 : positive

Family

Gene family
HOM03M001461
(52 genes in 14 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
3-hydroxy-3-methylglutaryl-coenzyme A reductase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidSi013486m
tidSi013486m
idPAC:19690967
GeneNameSi013486m.g

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0015936IEAGenome Projectcoenzyme A metabolic process
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0008299IEAInterProisoprenoid biosynthetic process
GO:0016104ISOPLAZA Integrative Orthologytriterpenoid biosynthetic processAT2G17370
GO:0016126ISOPLAZA Integrative Orthologysterol biosynthetic processAT2G17370

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004420IEAGenome Projecthydroxymethylglutaryl-CoA reductase (NADPH) activity
GO:0050662IEAGenome Projectcoenzyme binding
GO:0050661IEAInterProNADP binding
GO:0016616IEAInterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021IEAInterProintegral to membrane
GO:0043231ISOPLAZA Integrative Orthologyintracellular membrane-bounded organelleAT2G17370

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR023282Hydroxymethylglutaryl-CoA reductase, N-terminal
IPR002202Hydroxymethylglutaryl-CoA reductase, class I/II
IPR009029Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding
IPR009023Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding
IPR004554Hydroxymethylglutaryl-CoA reductase, eukaryotic/arcaheal type
IPR023074Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain
IPR023076Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site

Mapman id Description
16.1.2.3secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA reductase
No SignalP domains detected for this gene.