Gene: SI005G40060 (Setaria italica)

Overview top

Gene Identifier
SI005G40060
Transcript Identifier
SI005G40060.1
Gene Type
Coding gene
Location
scaffold_5 : 42113990-42118189 : negative

Family

Gene family
HOM03M004497
(21 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
nexin 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidSi000911m
tidSi000911m
idPAC:19678643
GeneNameSi000911m.g

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007154IEAGenome Projectcell communication
GO:0006623ISOPLAZA Integrative Orthologyprotein targeting to vacuoleAT5G06140
GO:0008333ISOPLAZA Integrative Orthologyendosome to lysosome transportAT5G06140
GO:0006896ISOPLAZA Integrative OrthologyGolgi to vacuole transportAT5G06140
GO:0048364ISOPLAZA Integrative Orthologyroot developmentAT5G06140
GO:0010252ISOPLAZA Integrative Orthologyauxin homeostasisAT5G06140
GO:0009958ISOPLAZA Integrative Orthologypositive gravitropismAT5G06140

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAGenome Projectprotein binding
GO:0035091IEAGenome Projectphosphatidylinositol binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829ISOPLAZA Integrative OrthologycytosolAT5G06140
GO:0005768ISOPLAZA Integrative OrthologyendosomeAT5G06140
GO:0043231ISOPLAZA Integrative Orthologyintracellular membrane-bounded organelleAT5G06140
GO:0030904ISOPLAZA Integrative Orthologyretromer complexAT5G06140
GO:0016020ISOPLAZA Integrative OrthologymembraneAT5G06140
GO:0005771ISOPLAZA Integrative Orthologymultivesicular bodyAT5G06140

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001683Phox homologous domain
IPR015404Vps5 C-terminal

Mapman id Description
29.3.4.3protein.targeting.secretory pathway.vacuole
No SignalP domains detected for this gene.