Gene: SI005G34060 (Setaria italica)

Overview top

Gene Identifier
SI005G34060
Transcript Identifier
SI005G34060.1
Gene Type
Coding gene
Location
scaffold_5 : 37995188-37995975 : positive

Family

Gene family
HOM03M001511
(51 genes in 13 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description (AnnoMine)
Copper transporter 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidSi002855m
tidSi002855m
idPAC:19676849
GeneNameSi002855m.g

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0035434IEAGenome Projectcopper ion transmembrane transport
GO:0006825ISOPLAZA Integrative Orthologycopper ion transportAT5G59030
GO:0048364ISOPLAZA Integrative Orthologyroot developmentAT5G59030
GO:0048235ISOPLAZA Integrative Orthologypollen sperm cell differentiationAT5G59030
GO:0015678ISOPLAZA Integrative Orthologyhigh-affinity copper ion transportAT3G46900

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005375IEAGenome Projectcopper ion transmembrane transporter activity
GO:0043621ISOPLAZA Integrative Orthologyprotein self-associationOS05G35050 OS01G56420
GO:0015089ISOPLAZA Integrative Orthologyhigh affinity copper ion transmembrane transporter activityAT3G46900

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021IEAGenome Projectintegral to membrane
GO:0046658ISOPLAZA Integrative Orthologyanchored to plasma membraneAT3G46900
GO:0005773ISOPLAZA Integrative OrthologyvacuoleAT2G26975

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR007274Ctr copper transporter

Mapman id Description
34.12transport.metal
No SignalP domains detected for this gene.