Gene: SI005G00620 (Setaria italica)

Overview top

Gene Identifier
SI005G00620
Transcript Identifier
SI005G00620.1
Gene Type
Coding gene
Location
scaffold_5 : 423457-425124 : positive

Family

Gene family
HOM03M003860
(24 genes in 13 species)
specific family

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Descriptions

Description (AnnoMine)
Salt stress root protein RS1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidSi002658m
tidSi002658m
idPAC:19676281
GeneNameSi002658m.g

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0051716IEAInterProcellular response to stimulus
GO:0009409ISOPLAZA Integrative Orthologyresponse to coldAT4G20260
GO:0042742ISOPLAZA Integrative Orthologydefense response to bacteriumAT4G20260
GO:0009414ISOPLAZA Integrative Orthologyresponse to water deprivationAT4G20260
GO:0010350ISOPLAZA Integrative Orthologycellular response to magnesium starvationAT4G20260
GO:0035865ISOPLAZA Integrative Orthologycellular response to potassium ionAT4G20260
GO:0071219ISOPLAZA Integrative Orthologycellular response to molecule of bacterial originAT4G20260
GO:0071280ISOPLAZA Integrative Orthologycellular response to copper ionAT4G20260
GO:0071281ISOPLAZA Integrative Orthologycellular response to iron ionAT4G20260
GO:0071286ISOPLAZA Integrative Orthologycellular response to magnesium ionAT4G20260
GO:0071325ISOPLAZA Integrative Orthologycellular response to mannitol stimulusAT4G20260
GO:0071472ISOPLAZA Integrative Orthologycellular response to salt stressAT4G20260
GO:0072709ISOPLAZA Integrative Orthologycellular response to sorbitolAT4G20260
GO:0006499ISOPLAZA Integrative OrthologyN-terminal protein myristoylationAT4G20260
GO:0031115ISOPLAZA Integrative Orthologynegative regulation of microtubule polymerizationAT4G20260
GO:0031117ISOPLAZA Integrative Orthologypositive regulation of microtubule depolymerizationAT4G20260
GO:0043622ISOPLAZA Integrative Orthologycortical microtubule organizationAT4G20260
GO:0051511ISOPLAZA Integrative Orthologynegative regulation of unidimensional cell growthAT4G20260
GO:0051592ISOPLAZA Integrative Orthologyresponse to calcium ionAT4G20260
GO:0075733ISOPLAZA Integrative Orthologyintracellular transport of virusAT4G20260

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005509ISOPLAZA Integrative Orthologycalcium ion bindingAT4G20260
GO:0005516ISOPLAZA Integrative Orthologycalmodulin bindingAT4G20260
GO:0005546ISOPLAZA Integrative Orthologyphosphatidylinositol-4,5-bisphosphate bindingAT4G20260
GO:0005547ISOPLAZA Integrative Orthologyphosphatidylinositol-3,4,5-trisphosphate bindingAT4G20260
GO:0043325ISOPLAZA Integrative Orthologyphosphatidylinositol-3,4-bisphosphate bindingAT4G20260
GO:0080025ISOPLAZA Integrative Orthologyphosphatidylinositol-3,5-bisphosphate bindingAT4G20260
GO:0005507ISOPLAZA Integrative Orthologycopper ion bindingAT4G20260
GO:0008017ISOPLAZA Integrative Orthologymicrotubule bindingAT4G20260
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT4G20260

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0046658IEAInterProanchored to plasma membrane
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT4G20260
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT4G20260
GO:0005773ISOPLAZA Integrative OrthologyvacuoleAT4G20260
GO:0005881ISOPLAZA Integrative Orthologycytoplasmic microtubuleAT4G20260
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT4G20260

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR008469DREPP family

Mapman id Description
20.2.3stress.abiotic.drought/salt
No SignalP domains detected for this gene.