Gene: SI004G30040 (Setaria italica)

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Gene Identifier
SI004G30040
Transcript Identifier
SI004G30040.1
Gene Type
Coding gene
Location
scaffold_4 : 40180759-40194452 : positive

Family

Gene family
HOM03M000279
(195 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
Jumonji/ARID domain-containing protein 2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidSi005667m
tidSi005667m
idPAC:19705450
GeneNameSi005667m.g

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114IEAGenome Projectoxidation-reduction process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAGenome Projectprotein binding
GO:0003677IEAGenome ProjectDNA binding
GO:0016706IEAGenome Projectoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0008270IEAInterProzinc ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622IEAGenome Projectintracellular
GO:0005634IEAGenome Projectnucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR019786Zinc finger, PHD-type, conserved site
IPR003349Transcription factor jumonji, JmjN
IPR011011Zinc finger, FYVE/PHD-type
IPR001965Zinc finger, PHD-type
IPR019787Zinc finger, PHD-finger
IPR001606ARID/BRIGHT DNA-binding domain
IPR003347JmjC domain
IPR013637Lysine-specific demethylase-like domain
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR004198Zinc finger, C5HC2-type
IPR001841Zinc finger, RING-type

Mapman id Description
27.3.57RNA.regulation of transcription.JUMONJI family
No SignalP domains detected for this gene.